Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo8g01831 ATGGAGGCCGACGCTATTGCCATGGACTCAACGGAGTTGAAGGTCAGCGAGCTATTGAAGGAGGTCAACGTAGACTACTCTCTTCAGTTCTCTAAGCTCGTCGACGACACCGTTTCCGCCATTAAAACCTCCATCGACAAAATCCCCAACGATTTTAAGCTTCGCGCTTTGTTACGGACATTGGCGCCGATAAGGTCGAGTTCAAATTTAAGAAGCCAACGTTTGTTAAGATTGGTGGAAGTTACTCCATACAGAGTCTTGCGAAGCCCTGAAGTTAATGTCGATCTTATTATCAGATTACCGAAGGAATGCTTCCATGAGAAGGATTATTTGAATTACAGATACCATGCTAAGAGGTGTCTCTATCTCTGTTTGATGAAAAAGTATTTGGAGAAGTCTTCATCTGTTGGTAGGGTTGAATGGTCCACTCTACAGAATGAAGCCAGGAAACCCTTGCTCGTTGTGTATCCAGCTGCTAAGCTTGTTGAAGTTCCTGATTTTTTTGTAAGAATTATTCCATCGGGCAAGGATATTTTTAGCATAGCGAAGTTGAACCTGAAGCGCAACAACATTCATAATTTGAGTAATGGGACTGCTCTTCAGGCTACGCCGAAGTACAATTCTAGTATTCTGGAAGACATGTTTATAGAGGATGCGGAATTCATCAACAACTATTTTCTTGGATGGAAGGAACTAAGAGAGGCTTTAATCCTGCTTAAGGTTTGGGCTCGACAAAGAAGTTCAATATATGTTCACGATTGCCTGAATGGGTTTTTGCTTTCTGTCATTTTGGCATATCTTGCTTCTAAGCAACATATTAGCAATTCAATGAAAACAACTGAAATAATTCGCGTCACGTTGAACTTCATTGCCACCTCAGAGTCGTGGAGCCGAGGTCTCTACTTTCCAAAGGAAGGCCAGAGCAATATTAACAAAGAGCAAAAGATGCAACTTAAAGAATCATTTCCAGTTGTCATATGTCATCCATCTGGAGGATTCAATTTGGCTTTTCGAATGTCTAGGATTGGTTTTACTCGGCTTCAAAATGAGGCTACTTTGACACTTAGGTGCATGGAAAAGTGTAGAGATGGTGGATTTGAGGAAGTGTTTATGACCAAGATTGACTATGCTGTTAAATATGACTATTGTATGAGAATAAATTTGAAGGGAAAGAAGGAGGTATTTGCATCGGGATTTTGTTTGGACGATGAGTGCTGGAGATCATATGAGGATAAAATACATGGTATTTTATCTAATGGGTTGATTGATAGAGCAAAATTCATTCAAGTTACATGGAGAAATACACATTGCCAGTGGAGTGTGGATGATGGCTTGTCGGTACTTGATAAAGTGCCCTTGTTCATAGGAATTTCAGTGAGTACTTTGGAGAAAGCATTTAGGATGGTTGATATTGGCCCAAATGCTGAAAGTAAAGAAGAGGCTCTTGAATTTCGAAAGTTTTGGGGAGAAAAAGCAGAGCTTAGAAGATTTAAAGATGGTAGAATTGCAGAAAGCACAGTATGGGAAAGTGAGCAATGGGCAAGGCATCTTGTTTTAAAAAGAATAGCTGAGCATGTACTTAGTCGGCATCTTTCTCTATCCAAGGAAAATATTGTAGTTGTCGTGGATCAACTTGATTTCTCTTTGCTTCACGGTGCTGGAGATCCTATATCATACTCTGGAAATTTGCTTGGGGCATTTGATGTTTTATCAAAGCGTTTGCGTCTTATTGAAGACCTCCCTTTGAAGGTGTCTAGTGTACAGCCTTTAGACTCTGCCTTCAGGTTTACATCAGTCTTCCCTCCTGAACCTCATCTTCTAGCTAATGAAAAAATTGGATCTCTCAGACTGAATAAGTTAGTTCCATCATGCATTCAACCACTGGAAATTATGATTCAGCTGGAAGGTTCTGGGAACTGGCCAATGGATGAAATTGCAATTGAAAAAACAAAATCTAGTTTCCTTATTCAAATTGGAGTGAGTCTTCAAAAGACATGGGGGATGACATGTACTGCCACTGAGGATAATGTGGATGTGTTAATGTCTGGATATGCATTTCGTCTAAAAATTTTGCATGAGAGGGGCCTTAGTTTGCTCAAAAAGGAAATTGGGAATGATCATGCTACGCGGGTTCCTTCTGTCGACAAGAAACTTTTTATCCGTAGTCAGCATGCTAACATGATCAATGGATTACAAAGTCGTTATCCAATATTTGGACCAGTAGTTAGACTTGCAAAACGATGGGCTGCTTCACATCTATTTTCAGCTTGCTTGGTAGAGGAGGCTGTTGAGCTATTGGTTGCATATCTTTTCCTTAATCCTTTGCCATATGATGTTCCCTGCTCACGGATCACTGGGTTTTTGAGGTTTCTGCGGTTACTCTCACACTATGATTGGACTTTCTCTCCGCTGGTTGTTGACATAAATAATGACCTGAGCCAAAGTGATGAGAAAGAAATAAATGACAACTTTTTGCTAAGAAGAAAAGGTCAGGGAGAAAATGGACAAAGTGTAGGGCCAGCAATGTTCTTAGCTACAGTTTATGATAAAGAATCTGAGGCTTGGACTGGATTATCACCTAGTGGAATGGAACTCAAAAGGTTAGTTGCATATGCCCGAAGCAGTGCCAATTTGCTGGCAAAACTCACATTTCAGGAAGAGATTGGTCCATATAGATGGGAGTGCCTTTTTAGAACTCCTTTAAACAATTACGATGCAGTAATTATTCTCCACAAGGACAAACTCCCGTATCCCCAAAGGCTTCTCTTCCCATCAGAAGTTAATCATGGAACACATGTTGCAGAAGGACACGCCAGCAAGTGTTTCCAACCCTTTTTGTTGCCTAAAGATTTGAAGGGCAGGCCAGAGGAACTTAAAAATAAGTTGCTGGTAGATTTTGATCCATCAAAGTGCTTTATCAGAGATTTAAAGCAAGAGTTCTCAACCACATTCCAAGTATGGCATGATTATCTGGGAGGCGATGTTATTGGCCTAACATGGGGGGAGTCATATTCTTCCAAGAAGCGGAAGCTCGAGGAAGCAGTTGAGGAAGAATATAACCCTTGCAAGGTGTTGAAAGCAGTGGGGAGAAGTTGGGAAAGGTATTCTCTTCCACCTCCATAA 3123 0.4079 MEADAIAMDSTELKVSELLKEVNVDYSLQFSKLVDDTVSAIKTSIDKIPNDFKLRALLRTLAPIRSSSNLRSQRLLRLVEVTPYRVLRSPEVNVDLIIRLPKECFHEKDYLNYRYHAKRCLYLCLMKKYLEKSSSVGRVEWSTLQNEARKPLLVVYPAAKLVEVPDFFVRIIPSGKDIFSIAKLNLKRNNIHNLSNGTALQATPKYNSSILEDMFIEDAEFINNYFLGWKELREALILLKVWARQRSSIYVHDCLNGFLLSVILAYLASKQHISNSMKTTEIIRVTLNFIATSESWSRGLYFPKEGQSNINKEQKMQLKESFPVVICHPSGGFNLAFRMSRIGFTRLQNEATLTLRCMEKCRDGGFEEVFMTKIDYAVKYDYCMRINLKGKKEVFASGFCLDDECWRSYEDKIHGILSNGLIDRAKFIQVTWRNTHCQWSVDDGLSVLDKVPLFIGISVSTLEKAFRMVDIGPNAESKEEALEFRKFWGEKAELRRFKDGRIAESTVWESEQWARHLVLKRIAEHVLSRHLSLSKENIVVVVDQLDFSLLHGAGDPISYSGNLLGAFDVLSKRLRLIEDLPLKVSSVQPLDSAFRFTSVFPPEPHLLANEKIGSLRLNKLVPSCIQPLEIMIQLEGSGNWPMDEIAIEKTKSSFLIQIGVSLQKTWGMTCTATEDNVDVLMSGYAFRLKILHERGLSLLKKEIGNDHATRVPSVDKKLFIRSQHANMINGLQSRYPIFGPVVRLAKRWAASHLFSACLVEEAVELLVAYLFLNPLPYDVPCSRITGFLRFLRLLSHYDWTFSPLVVDINNDLSQSDEKEINDNFLLRRKGQGENGQSVGPAMFLATVYDKESEAWTGLSPSGMELKRLVAYARSSANLLAKLTFQEEIGPYRWECLFRTPLNNYDAVIILHKDKLPYPQRLLFPSEVNHGTHVAEGHASKCFQPFLLPKDLKGRPEELKNKLLVDFDPSKCFIRDLKQEFSTTFQVWHDYLGGDVIGLTWGESYSSKKRKLEEAVEEEYNPCKVLKAVGRSWERYSLPPP 1040
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo8g01831 1040 PANTHER NUCLEOLAR RNA-ASSOCIATED PROTEIN 7 1011 IPR005554 -
Pumo8g01831 1040 Pfam Nrap protein domain 3 377 532 IPR035368 -
Pumo8g01831 1040 Pfam Nrap protein nucleotidyltransferase domain 4 560 732 IPR035369 -
Pumo8g01831 1040 Gene3D - 218 376 - -
Pumo8g01831 1040 Pfam Nrap protein domain 1 94 218 IPR035082 -
Pumo8g01831 1040 FunFam Nucleolar protein 6 206 376 - -
Pumo8g01831 1040 Pfam Nrap protein PAP/OAS1-like domain 5 735 887 IPR035370 -
Pumo8g01831 1040 Pfam Nrap protein domain 6 901 1030 IPR035371 -
Pumo8g01831 1040 Pfam Nrap protein PAP/OAS-like domain 232 373 IPR035367 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo8g01831 K14544 - gmx:100776157 1874.75
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo8g01831 8 54568995 54577059 Pumo8g01831 8 54568995 54577059 ECH