Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo8g01787 ATGATGCTCCTCAGAACAACATTCAATGATCTCATACCCCAACAATTCCGATCCTTCATCGCCTCAAAGCTAGAGGCCTTCTTCTCCAAATACCAAGCTAATAACCACATCTCTCTCAAAATTAACCGATATTGGGGTGAAAATTCAGAAGATCGCAATGAACTTTTTGATGCTGCCCAGGAGTACCTCCCCACCAGGATTACTCACACCTACAAATTGCTCAAAGTTGGCAAACAAAAAGACGAGAAACACCTTGAGCTCGCAGTGGATGGAAGTGAAGATGTGAGAGAGAGTGTTCGATCGGTATATTCCGCATACGAGGCCATGAAAGCTGAGAGGAGGATTGTGAAAATCTATTCCAGGTTAGATGGCTATTGGAACGAAAGTGAGTTATCACATCCTGCCACATTCGACTCACTAGCCTTGAGTCCTGAGTTGAAGAGGAAGGAACATTACAAGAAAGTGGGGAGGCCTTGGAAACGTGGCTACTTGTTGTATGGACCCGCCGGAACTGGAAAATCTAGCATTATTGCAGCTATGGCAAACTACTTGAAATTCGATGTGTATGATTTGGAGCTTACTTCTATTTATTCTAACTCAGACCTCATGCGATCCATGAAGGAAGTATCAAACCGTTCCATCATCGTGATTGAAGACATAGACTGCAACAAAGAGGTGCATGCTAGATCAAAAGCAAATGGTCTTTCAGATGATCAAGATTCAGACTCTGATAACGAGGGTGCCAAGGATAAGACTAAGAGGTTTACTCTGTCGGGTTTCCTTAACTACATCCAGTGGCGGATCCAGAAAAAAATATTAGTGGGGACAAAAAAATTTATAATATTTTCATAG 852 0.4237 MMLLRTTFNDLIPQQFRSFIASKLEAFFSKYQANNHISLKINRYWGENSEDRNELFDAAQEYLPTRITHTYKLLKVGKQKDEKHLELAVDGSEDVRESVRSVYSAYEAMKAERRIVKIYSRLDGYWNESELSHPATFDSLALSPELKRKEHYKKVGRPWKRGYLLYGPAGTGKSSIIAAMANYLKFDVYDLELTSIYSNSDLMRSMKEVSNRSIIVIEDIDCNKEVHARSKANGLSDDQDSDSDNEGAKDKTKRFTLSGFLNYIQWRIQKKILVGTKKFIIFS 283
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo8g01787 283 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 132 220 IPR027417 -
Pumo8g01787 283 Pfam ATPase family associated with various cellular activities (AAA) 164 223 IPR003959 GO:0005524|GO:0016887
Pumo8g01787 283 Pfam Domain associated at C-terminal with AAA 12 98 IPR025753 -
Pumo8g01787 283 Gene3D - 135 280 IPR027417 -
Pumo8g01787 283 MobiDBLite consensus disorder prediction 231 250 - -
Pumo8g01787 283 PANTHER BCS1 AAA-TYPE ATPASE 1 265 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo8g01787 Pumo-Chr8 54012985 54020473 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo8g01787 - K08900 gmx:100789094 409.453
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo8g01787 8 54012985 54020473 Pumo8g01787 8 54012985 54020473 ECH