Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo8g01782 ATGGTGAGGTTAAGGTGGACTACACTCCTAACGGTCACGTTGGCTATTTTGCTGTTTTGGATCGAACCGCTGCAAGTCCAAGCCAATAACTCAGTTTCCGCCTTCGTTCAAAACGTCATCTACTCTAACAGAATCGCCGTTTTTTCCAAATCCTATTGCCCCTACTGTTTGCGCGCCAAACGCATGCTTGCTGAACTAAATGAGAAACCCTTTGTGGTGGAGCTCGATTTGCGAGATGATGGGTATCAAATTCAGAGTGTTCTTCTCGATTTGATTGGTAGAAGGACAGTCCCACAAGTGTTTGTGAATGGCAAGCATATTGGTGGATCAGATGATCTCACAGCTGCAATCCAAAGTGGTGAATTGCAGAAACTTCTCAGTGCAAGTTGA 390 0.4513 MVRLRWTTLLTVTLAILLFWIEPLQVQANNSVSAFVQNVIYSNRIAVFSKSYCPYCLRAKRMLAELNEKPFVVELDLRDDGYQIQSVLLDLIGRRTVPQVFVNGKHIGGSDDLTAAIQSGELQKLLSAS 129
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo8g01782 129 Gene3D Glutaredoxin 26 129 - -
Pumo8g01782 129 ProSiteProfiles Glutaredoxin domain profile. 33 129 - -
Pumo8g01782 129 NCBIfam glutaredoxin 45 126 IPR011899 -
Pumo8g01782 129 SUPERFAMILY Thioredoxin-like 34 127 IPR036249 -
Pumo8g01782 129 ProSitePatterns Glutaredoxin active site. 47 63 IPR011767 -
Pumo8g01782 129 Pfam Glutaredoxin 45 107 IPR002109 -
Pumo8g01782 129 FunFam Glutaredoxin 2 27 129 - -
Pumo8g01782 129 PRINTS Glutaredoxin signature 90 103 IPR014025 -
Pumo8g01782 129 PRINTS Glutaredoxin signature 104 117 IPR014025 -
Pumo8g01782 129 PRINTS Glutaredoxin signature 45 63 IPR014025 -
Pumo8g01782 129 PANTHER GLUTAREDOXIN 2 26 127 - -
Pumo8g01782 129 CDD GRX_GRXh_1_2_like 44 125 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo8g01782 Pumo-Chr8 53949519 53950885 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo8g01782 36 115 Miscellaneous Gene Families AT4G15700 30.000 1.66e-08 47.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo8g01782 K03676 - gmx:100500348 226.483
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo8g01782 8 53949519 53950885 Pumo8g01782 8 53949519 53950885 ECH