Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo8g01666 ATGGGTGAAGACTTGGTTCAGTGCTCCATGGACACGGTACCATTGTCAGTGTCACCGATCAGTTTCCTAGAAGGAGCAGCCACTAACTATGGTGATAAGATCTCCATCATCTACAATGATAATGTGAGATTTTCTTGGAGAGAAACCCATGAAAGATGCGTGAAACTTGCTTCGGCTTTGGTTAACTTAGGGATTTCTCACAACGATATTGTTGCAGCTTTGGCACCAAATATGCCAGCACTATACGAGCTTCATTTTAGTGTTCCTATGGCAGGGGGTGTTCTTTCTACGCTCAATACCCAATTGGATGTAACAACATTAGCTCTAATATTGGAACAATTAGAGCCATGCAAAATCATGTTTGTGGACTACCAATTAATTGATTCTGCTCTCAAAGCATGTGAAATTCTCTCCCAGAGAAAATGCAAGCCACCCCTCATTGTCCTAATGCCACATTATTATGACCATGAACCATCTTTCTTAGTGAAGGATATCCCACCAGGTACCTTAAACTACAATGAAGTTCTTGCAATTGGACAAAAAGATTTTGAGACTTTAAAACCAAGCAATGAATGCAATCCAATATCAGTGAACTTCACATCAGGCTCCACAGGGATTCTTCCAAAAGGAGCTGTTTATAGTCATAGAGCTGCATATCTCAATTCACTTGCAGCAATTGCTCGTTTTGAGATGAAACAAATGCCAGTGTTCCTATGGACAGTTGACATGTTTCGTTGCAATGGGTGGTGCTTCACTTGGGGAATGGCTGCTATTGGTGGCACCAATATTTGCATAAGGAATGTCTCAGCAAAAGGCATATATGATGCAATTTGCCTTTATAAGGTGACTCATTTTTGTGGTGCACCTACCCTTTTGGACATGATTGCAGATGCATCACCTAGTGACCAGAGGCCTCTGCCTCATAGGGTGAGTGTCACAGTTGCAGGTGTGCTACCACCATTTCATGTTCTTAACAAGATGTCAGAACTTGGGTTTGATGTGAACATTGGATATGGCATGACAGAGGCTTTAGGTCCTGTCATTTTAAGACCATGGAACCCCAATTCAGATGGTGAACATACAAAGCTGAATTATTGGGTTTCGGAGTTTATGCAGGATGTTGATGTGAAGGATCCAGAGACTAATGAGAGTACTCCTCATGATGGGAAAACCATAGGTGAAATTACGTTCAAAGGGCCTGCTTTGATGCTGGGGTACCTCAAGAATCCACAAGCAACTGAAAAGGCTTTTAGGGGTGGATGGTATAGAACTGGGGACCTTGGTGTTAGAGAACCAAATGGTTCTATAACAATGAAGGATAGAGCAAAGGATATTATATATTCTAAGGGAGAGGCTGTGAGTTCACTAGAGGTGGAAGCTGTGTTGTTGAATCATCCAATGGTTTTGAAAGCTGCTGTAGTGGGGAGATGTGATGAATGCTTGGTGGAATCACCATGTGCAATTGTCAAATTGAAGGATGGATGTAGTGCCACTGTTGAAGATATCATCAAGTTCTGTGAAGATCATTTGGCTACTCACATGGTTCCTAGGAGTGTGGTATTTGGAGATTTGCCTGTTAATTCAACTGGGAAGGTTCAGAAATTTCGCATCAGGGAGAAGATTAAAAGCAATGAGTGGTATGACTCACTGAATTAG 1656 0.4191 MGEDLVQCSMDTVPLSVSPISFLEGAATNYGDKISIIYNDNVRFSWRETHERCVKLASALVNLGISHNDIVAALAPNMPALYELHFSVPMAGGVLSTLNTQLDVTTLALILEQLEPCKIMFVDYQLIDSALKACEILSQRKCKPPLIVLMPHYYDHEPSFLVKDIPPGTLNYNEVLAIGQKDFETLKPSNECNPISVNFTSGSTGILPKGAVYSHRAAYLNSLAAIARFEMKQMPVFLWTVDMFRCNGWCFTWGMAAIGGTNICIRNVSAKGIYDAICLYKVTHFCGAPTLLDMIADASPSDQRPLPHRVSVTVAGVLPPFHVLNKMSELGFDVNIGYGMTEALGPVILRPWNPNSDGEHTKLNYWVSEFMQDVDVKDPETNESTPHDGKTIGEITFKGPALMLGYLKNPQATEKAFRGGWYRTGDLGVREPNGSITMKDRAKDIIYSKGEAVSSLEVEAVLLNHPMVLKAAVVGRCDECLVESPCAIVKLKDGCSATVEDIIKFCEDHLATHMVPRSVVFGDLPVNSTGKVQKFRIREKIKSNEWYDSLN 551
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo8g01666 551 SUPERFAMILY Acetyl-CoA synthetase-like 18 543 - -
Pumo8g01666 551 Pfam AMP-binding enzyme C-terminal domain 457 531 IPR025110 -
Pumo8g01666 551 FunFam 2,3-dihydroxybenzoate-AMP ligase 443 545 - -
Pumo8g01666 551 Gene3D - 443 545 IPR045851 -
Pumo8g01666 551 PANTHER ACYL-ACTIVATING ENZYME 5 543 - -
Pumo8g01666 551 CDD ttLC_FACS_AEE21_like 13 539 - -
Pumo8g01666 551 Pfam AMP-binding enzyme 25 447 IPR000873 -
Pumo8g01666 551 Gene3D - 4 442 IPR042099 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo8g01666 Pumo-Chr8 52619212 52630136 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo8g01666 81 543 Miscellaneous Gene Families AT1G20560 50.426 7.49e-163 470
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo8g01666 - - gmx:100819291 984.556
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo8g01666 8 52619212 52630136 Pumo8g01666 8 52619212 52630136 ECH