Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo8g01663 ATGGCTTGTCTCAGCCGCCACCACCACCGCGCCTGGCTCACTTCCCCTGACGACATGCTCCAACGCTGCCCCCTCTCCGCCCACCACCGCCGTCTCCACGACGACGACGCCGAGCCCATTTGCCTCCCTCCTCTCTCCTCCGCCTATCGCATCTTCCCCGTCTACGCCATGGGCGTCCCCGACCCGACCCCCGAACCCGAATTAGACGGACCCGACCCGATTTGGGACGCCGTCAGGGACGAAGCCAAGCTCGAGGCGGAGAAGGAGCCAATTCTGAGTAGCTTCTTGTACGCTAGTATTTTGGCGCATGATTGCTTGGAGCAAGCATTGGCTTTCGTCGTCGCCAACCGTCTCCAAAACCCTACTCTCTTGGCCACTCAGCTTATGGATATTTTCTGCAATGTCATTTTGCATGACAAAGCTATCCAGCGATCCATTCGCCTTGATGTTCAGGCATTTAAAGATCGTGACCCTGCTTGTTTGTCGTATTGCTCTGCGCTTTTGTATATGAAGGGTTATCATGCTCTGCAAGTACATCGAGTAGCCCATGCATTGTGGCACCAGGGACGCAAAGTCTTGGCCCTGGCTTTGCAAAGCCGTGTTAGTGAGGTTTTCGGAGTGGACATTCATCCAGCTGCGAAAATTGGGGAGGGAATTTTATTAGATCATGGGACAGGTGTGGTTATTGGTGAAACTGCTATTGTTGGAAACAGAGTTTCATTGATGCATGGAGTAACATTAGGAGGCACGGGGAAGGAAATAGGTGATCGCCATCCCAAAGTTGGTGAAGGGGCACTAATTGGAGCTAGTGCAACTATACTTGGGAATATAAAGATTGGTGAAGGTGCGATGATAGCTGCGGGCTCCTTGGTGTTAAAAGATGTCCCTCCCCACAGCATTGCGGCAGGAATACCAGCTAAAGTTATTAGTGGTCTACAGGAGCATGACCCATCTTTAACCATGAAGCATGATGCTACTAAAGATTTTTTCACACATGTAGCAACTAACTTCAGAGATGAAAAGCCCAATGGAGTTCAAAATCCAGATAGAAATGAAGTGGACAATTGA 1068 0.5056 MACLSRHHHRAWLTSPDDMLQRCPLSAHHRRLHDDDAEPICLPPLSSAYRIFPVYAMGVPDPTPEPELDGPDPIWDAVRDEAKLEAEKEPILSSFLYASILAHDCLEQALAFVVANRLQNPTLLATQLMDIFCNVILHDKAIQRSIRLDVQAFKDRDPACLSYCSALLYMKGYHALQVHRVAHALWHQGRKVLALALQSRVSEVFGVDIHPAAKIGEGILLDHGTGVVIGETAIVGNRVSLMHGVTLGGTGKEIGDRHPKVGEGALIGASATILGNIKIGEGAMIAAGSLVLKDVPPHSIAAGIPAKVISGLQEHDPSLTMKHDATKDFFTHVATNFRDEKPNGVQNPDRNEVDN 355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo8g01663 355 Pfam Bacterial transferase hexapeptide (six repeats) 258 291 IPR001451 -
Pumo8g01663 355 Pfam Serine acetyltransferase, N-terminal 74 177 IPR010493 GO:0005737|GO:0006535|GO:0009001
Pumo8g01663 355 FunFam Serine acetyltransferase 208 329 - -
Pumo8g01663 355 Gene3D serine acetyltransferase, domain 1 58 207 IPR042122 -
Pumo8g01663 355 NCBIfam serine O-acetyltransferase 146 307 IPR005881 GO:0005737|GO:0006535|GO:0009001
Pumo8g01663 355 PANTHER SERINE ACETYLTRANSFERASE 69 334 - -
Pumo8g01663 355 SMART SATase_N_2_a 74 178 IPR010493 GO:0005737|GO:0006535|GO:0009001
Pumo8g01663 355 SUPERFAMILY Trimeric LpxA-like enzymes 73 322 IPR011004 -
Pumo8g01663 355 CDD LbH_SAT 205 305 IPR045304 -
Pumo8g01663 355 Gene3D Hexapeptide repeat proteins 208 336 - -
Pumo8g01663 355 FunFam Serine acetyltransferase 4 62 207 - -
Pumo8g01663 355 ProSitePatterns Hexapeptide-repeat containing-transferases signature. 267 295 IPR018357 GO:0016740
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo8g01663 Pumo-Chr8 52557373 52561742 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo8g01663 52 344 Miscellaneous Gene Families AT2G17640 74.237 6.12e-154 434
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo8g01663 K00640 - gmx:100775449 679.863
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo8g01663 8 52557373 52561742 Pumo8g01663 8 52557373 52561742 ECH