Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo8g01662 ATGATGGATACTCACGCAGAAGATTCTGCTAGACCTGAGGAGCATTTGCCTGATGTGAATCATCATAACGAAGATGGAAGCAATGTAAATCTTCTATTGGAAAATGGTTTGTCTGATGACAATCAAGGTCCTGCTGATACTCACGATCAGATTCTACAAATGGTTATGGACCTCAGGTGTCAGAATGACTTCTTGAAGTCCCAGTTTGAGGGATTTAAAAATGTAAACAGTGTACATAGTGACTCCAGTATACAGAAAGGAGTTGGTGGTTTGGAAGATGGGGAATCTGACATTGTGAAAGAACTAAAGGAAAAGATACAATTGTTAAATAAAGAATTTCTGGAAGAAAAACAAACAAGAATTGCATCAGAAGAGGCTTTGAAGCATCTTCAAACGGCATACTCAGAGGCAGAAGCAAAGGCCCAAGAGCTCTCTGAAAAGCTTGCAGAAGCTCAAACAAAGTTGGACCAAGAAGTAAAAGAGCGTGAAGAGAAGTACTCTGAACTTGACTCCAAGTTTAATAGGCTTCACAAACGAGCAAAACAGCGCATTCAAGAAATTCAAAAGGAAAAAGATGATCTTGAGGCCCGCTTCTCTGAGGTTAATGAAATTGCAGAGCGAGCATCATCCCAACAGTCAGCATTGCAACAAGAATTAGAGCGCACTAGGAAGCAAGCAAATGAGGCATTGAAAGCCATGGATGGTGATAGACAACAACTAAGAAGTGCAAACAACAATCTTCGAGATACCATTGAAGATTTAAGGCGTTTGTTGCAACCTAAAGAGAGTGCTATTGAGGCATTGCAACAATCAGTTGCAGAAAAGGAACAGATGTTGGAAGATATGAGAGGGTTGCTTCAGGCTGCTGAAGAAAAAAGGCAAGCTGCACTAGCTGAGCTCTCAGCTAAACATCAAAAGAATATAGAGAGTTTGGAGGCTCAACTTAATGATGCATTGTCTGACAGAAGTAAGGCAACTGAATCCATTTCTTCACTGCAGGTTCTAGTTGCAGAAAAAGAATCCAGAATTGCAGAGATGGAAGCAGCATCAACTGGGGAAGCAGCACGACTCAGAGCAGCTGTGGAAAGTGTGAAAGGGGAGCTTGCTCACCTAAAAGAGGAGCATGAAAAAGAAAGGGTAAGCTGGGAGACTGCTTCTCAGGCACTTAAAGCAAAACTTGAAATTGCAGAGAGCAACTGCATACGTGCAGAAGTTGAAGTAGCAAAAATAAGAAGTCAGCTGGAATCAGAGGTATCCGCACAAACAAGGATCCTGAATATGAGAGATGCTGAATTGTTGGCTGCCAAAGAAGAGATCAGCTCTCTTGAGAAGGAATTTTCTTCATACAAAGTTCGTGCACATGCACTTCTTCAAAAGAAGGATGCTGAACTGGCTGCTGCTAAAGATTCTGAACAACTCAAAGCTCTAGAGGAAACTCTGAAAGAGGTTGAAAATGAAGTATTATCAATAACAGAAGAAAGGGATAGAGTTCTTCAAGATCTTCAATCTGCTATGGCTAATCATGAGAAAGAACTTGCAGAAAGAGGCACAGCCCTTGAAAATTCCAAGCAACAGATAAGGAGCTTAGAAATAAAGCTTGACTCAGCTAATGTTAAACACCTAAAAGAGAAAGAGGAATGGGGACTAAGTCTTCAAAATGTAGAAGAAACATGGAGAATCAAATGCGAGGCAATGAAGGCTGAAAATGAAGCAACTGCTGCCAAAGATATGCAAAAGGAATTGGAAGAGCTCAAACAGCGATGCAAAAAATTGAAGGAAGAGCATGCTTCATTTCATGATCTTGCTGATAGAATGATTGAGGAGAAAGACTATGAGATATCCAGACTTTTAGATGAAAATAAGAGTCTTCGTCAGTCTCTTCAATCTAGACCACCTGTCGATCAAAATGATAATTATACAACAGCGTTGCATAAATTGGATTCAACAAATTTAAGCCCCTCAGCTGCAGAACAGCAAATTCTGATTTTGGCTAGACAACAAGCCCAAAGAGAGGAAGAGCTAGCACAGTCACAGCGCCATATTTTAGCTCTTCAAGAAGAAATTGAGGAGCTTGAACGTGAGAATCGTCTCCACAGCCAACAGGAGGCAATGTTAAAGACTGAATTTCGCAACATGGAAAGATCAAAGAAAAGGGAAGGTGTAGATATGACATATTTGAAAAATGTTATCTTAAAGCTGCTTGAGACTGGTGAAGTTGAGGTATTGCTACCAGTTATTGGAATGCTGCTTCAGTTTAGTCCAGAAGAGATGCAGAAGTGTCAACAGGCATATCAAAACTCAACAGATGTTCCACCAAATCCTGCAAACGATACTTCAGGATCTGGCCTATCGCTTTTCTCAAGATTCACATTTTCTTAA 2379 0.4056 MMDTHAEDSARPEEHLPDVNHHNEDGSNVNLLLENGLSDDNQGPADTHDQILQMVMDLRCQNDFLKSQFEGFKNVNSVHSDSSIQKGVGGLEDGESDIVKELKEKIQLLNKEFLEEKQTRIASEEALKHLQTAYSEAEAKAQELSEKLAEAQTKLDQEVKEREEKYSELDSKFNRLHKRAKQRIQEIQKEKDDLEARFSEVNEIAERASSQQSALQQELERTRKQANEALKAMDGDRQQLRSANNNLRDTIEDLRRLLQPKESAIEALQQSVAEKEQMLEDMRGLLQAAEEKRQAALAELSAKHQKNIESLEAQLNDALSDRSKATESISSLQVLVAEKESRIAEMEAASTGEAARLRAAVESVKGELAHLKEEHEKERVSWETASQALKAKLEIAESNCIRAEVEVAKIRSQLESEVSAQTRILNMRDAELLAAKEEISSLEKEFSSYKVRAHALLQKKDAELAAAKDSEQLKALEETLKEVENEVLSITEERDRVLQDLQSAMANHEKELAERGTALENSKQQIRSLEIKLDSANVKHLKEKEEWGLSLQNVEETWRIKCEAMKAENEATAAKDMQKELEELKQRCKKLKEEHASFHDLADRMIEEKDYEISRLLDENKSLRQSLQSRPPVDQNDNYTTALHKLDSTNLSPSAAEQQILILARQQAQREEELAQSQRHILALQEEIEELERENRLHSQQEAMLKTEFRNMERSKKREGVDMTYLKNVILKLLETGEVEVLLPVIGMLLQFSPEEMQKCQQAYQNSTDVPPNPANDTSGSGLSLFSRFTFS 792
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo8g01662 792 Coils Coil 354 413 - -
Pumo8g01662 792 Gene3D - 155 307 - -
Pumo8g01662 792 SMART 1grip 719 763 IPR000237 -
Pumo8g01662 792 Coils Coil 127 168 - -
Pumo8g01662 792 MobiDBLite consensus disorder prediction 1 22 - -
Pumo8g01662 792 Coils Coil 564 601 - -
Pumo8g01662 792 Coils Coil 425 452 - -
Pumo8g01662 792 MobiDBLite consensus disorder prediction 762 781 - -
Pumo8g01662 792 Coils Coil 667 708 - -
Pumo8g01662 792 PANTHER SYNAPTONEMAL COMPLEX PROTEIN-RELATED 97 774 - -
Pumo8g01662 792 MobiDBLite consensus disorder prediction 1 46 - -
Pumo8g01662 792 Coils Coil 177 257 - -
Pumo8g01662 792 Coils Coil 99 119 - -
Pumo8g01662 792 Coils Coil 459 500 - -
Pumo8g01662 792 Coils Coil 606 626 - -
Pumo8g01662 792 Coils Coil 265 349 - -
Pumo8g01662 792 MobiDBLite consensus disorder prediction 23 46 - -
Pumo8g01662 792 ProSiteProfiles GRIP domain profile. 716 763 IPR000237 -
Pumo8g01662 792 Pfam GRIP domain 720 759 IPR000237 -
Pumo8g01662 792 Coils Coil 519 546 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo8g01662 - - gmx:100775990 1401.73
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo8g01662 8 52544741 52555318 Pumo8g01662 8 52544741 52555318 ECH