Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo8g01659 ATGCTCAGAATGAACCACAACAAACGAGGCGTGCTTGCTCGTTTGAAGACTCTCGTCAACTCTCACTCTCAGAGCTTCCACTCCCCTGCGCCCAAACGACCAAAGCAAGATCGTTCGTCTCCCGAAAATGACTTAGATTACTCTATTTGCCGAGGCCGCATTGGCGTCTCAAAATGGAAGACTTTGGATGCAGAGGAGCTTGGTATAACCAGTTCTATGATTTCATACCCATCTATGTTTGTCCTGAAACTTCTTCGGAGCAAAGGGTTTGAGTCCTACTTAGTAGGTGGGTGTGTGAGAGATCTACTACTGAATAGAACCCCAAAAGATTTTGATGTTATCACCACAGCAAAGCTTATGGAGGTGAGAAAGCAGTTACGTCGTTCAGCTCATGCTGAAGTTGTTGGACGTCGTTTTCCAGTTTGCTTGGTTCATATAAAAGGTTCTGTAGTTGAGGTAACCAGTTTTGAGACTGTGGCACGAACTTCCAATGGGAAGGAACAATTTCTATACTCTCTGTTGCCCAAATGTAGTAATAAAAAAGACTTATTTCGCTGTAAAAACTCCTTGCGCAGGGACTTCACAATTAATAGTTTATTTTATGACCCCTTTGCCAATAAAATCTACGATTACATGAATGGATTGGCCGATTTGAGGTCCTTAAAGCTAGAAACTGTTATCCCTGCTCAGCTGTCCTTTAAAGAGGATCCTGGAAGAATTTTGCGTGGCTTCAGAATTGCAGCTCGGCTTGGTTTATCATTATCAAGGGAGACTGAGGCTGCAATCTGGACATATTCTTCACTAGTTAAGAGCTTGGACAAGAATAAAATTATGATTGAATTGAACTATATGCTGTCTTATGGAGCTGCTGAACCATCTCTACGTCTACTTTGGAAGTTCAAATTGCTTGAATTTTTACTTCCAGTACATGCAGCTTATCTTGATGAACAAGCTATTAAAGAAGATGCTCAGGCTTCCAATATGTTGATGAAATTATTCTTCCATCTGGATAGTTTGGTTGCATGCGGTCGACCTTGTGATTGCACTCTTTGGATTGGATTGCTAGCATTTCACCTGGCATTAGTAAATGATCCTCAAGATGCTTTAGTGGTGTGGGCATTTGCTTCTGTTCTATATCACGGGGAGTGGGAAGGTGTTAAATTTGCTAAAGAACATACAAAAATGAGCGTTAATTTTGCACCTGAAATAAGGACGTCCAGTATATACAAATCAGATGAAGAAATTGCGAAAGCAGTCACTACATTGGCATCTTTGGTGATGCACTCCGTTCCTGCTCTGGTTGAGAACAATAGTCTTCTTCAGTTCATGTCTAGATACCCATCTTTTTCACAACCTGGCATGGTATTTGTACCCAAGAAAGCAGGAAAACTTGCTTCTGCGATTTTCAAAATGCTGGCCAGTGATGTTGAATATTATAAGACTGAAAGAAGAAAAAAATCAAAGATAAACTATGACATGCTTGGGAAGGGACACCTTTCAGAGACTGCATTTGTTTTGGGCAAAATTGTTCTTGAAACTATGAGTAGTGGAATTGTTGGGGATGGGGAGGATTCTGAAGCTGGACAATGTGACGTTAAGACTGAGGGCACCGAAGAAAATGGTCAATCGCAACTTCCAGATCTAGTAAACCATCAAGTGGCGGCAATGAATGGTGAAGGACAACTTTTATCAATACCAAATTCAGAATGTAGGCAAGGAAAAAACAAGAAACGGAAATTGGTTGAGAATAGATGTATTGCAAAGAAGAGAATGGGTTCAGGGAACCAAGAATTGTCTGAGAAATTTGAATACAACGAAAATAAAGAAGAGCACCAGAAGCTAATTAAGTTAAGCCAGAAGGTTGATCTGTCTACAAAGGACTCTTTGCCCAAAAAGAAAAATTATCACAGAAAACGGCTGATAAGTGATAGGAAGAAAATCACCAGTGCCAATAAAAGTTCTTTAGACCAAGCTAGGCATATGAAGACGGATGAACACAGCACATGTATGCCATCACAATCTACGGTATCCAAGAATCATCAGGTGATAGCTAACAACAACATAGACGTGGATGCAAAAGCAACAAACGAGTCAGACTTAAAGAAGAAAAAAATGCGTTCATCACTAGTTGAAATGTTTAAAAGTGAAACAAAGACAGAAACCACATAA 2169 0.4016 MLRMNHNKRGVLARLKTLVNSHSQSFHSPAPKRPKQDRSSPENDLDYSICRGRIGVSKWKTLDAEELGITSSMISYPSMFVLKLLRSKGFESYLVGGCVRDLLLNRTPKDFDVITTAKLMEVRKQLRRSAHAEVVGRRFPVCLVHIKGSVVEVTSFETVARTSNGKEQFLYSLLPKCSNKKDLFRCKNSLRRDFTINSLFYDPFANKIYDYMNGLADLRSLKLETVIPAQLSFKEDPGRILRGFRIAARLGLSLSRETEAAIWTYSSLVKSLDKNKIMIELNYMLSYGAAEPSLRLLWKFKLLEFLLPVHAAYLDEQAIKEDAQASNMLMKLFFHLDSLVACGRPCDCTLWIGLLAFHLALVNDPQDALVVWAFASVLYHGEWEGVKFAKEHTKMSVNFAPEIRTSSIYKSDEEIAKAVTTLASLVMHSVPALVENNSLLQFMSRYPSFSQPGMVFVPKKAGKLASAIFKMLASDVEYYKTERRKKSKINYDMLGKGHLSETAFVLGKIVLETMSSGIVGDGEDSEAGQCDVKTEGTEENGQSQLPDLVNHQVAAMNGEGQLLSIPNSECRQGKNKKRKLVENRCIAKKRMGSGNQELSEKFEYNENKEEHQKLIKLSQKVDLSTKDSLPKKKNYHRKRLISDRKKITSANKSSLDQARHMKTDEHSTCMPSQSTVSKNHQVIANNNIDVDAKATNESDLKKKKMRSSLVEMFKSETKTETT 722
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo8g01659 722 Gene3D - 225 451 - -
Pumo8g01659 722 MobiDBLite consensus disorder prediction 651 675 - -
Pumo8g01659 722 PANTHER POLYNUCLEOTIDE ADENYLYLTRANSFERASE FAMILY PROTEIN 23 529 - -
Pumo8g01659 722 MobiDBLite consensus disorder prediction 21 46 - -
Pumo8g01659 722 Pfam Probable RNA and SrmB- binding site of polymerase A 251 313 IPR032828 -
Pumo8g01659 722 SUPERFAMILY Nucleotidyltransferase 67 219 IPR043519 -
Pumo8g01659 722 Pfam Poly A polymerase head domain 93 222 IPR002646 GO:0003723|GO:0006396|GO:0016779
Pumo8g01659 722 Gene3D Beta Polymerase, domain 2 76 224 IPR043519 -
Pumo8g01659 722 CDD NT_ClassII-CCAase 83 219 IPR002646 GO:0003723|GO:0006396|GO:0016779
Pumo8g01659 722 SUPERFAMILY Poly A polymerase C-terminal region-like 223 367 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo8g01659 Pumo-Chr8 52488523 52501094 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo8g01659 - - gmx:100794882 1250.73
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo8g01659 8 52488523 52501094 Pumo8g01659 8 52488523 52501094 ECH