Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo8g01648 ATGTTCGTGAAGAAGCTCGTGGAGAAAGCATCCATAAAGAAGCCTCTTGGAAATTCATTGGATGGGTTAAAAGCTAATGATGTAGATCCACGTTTGGTATTTCATCAAGGGGTACCATCTGGTGGTGCCAAGTTTGCCTATGACAATATTCAGAAGATGCTGGCTCTTTCTACCAAGGATGGACGGATTAAACTATTTGGCAAAGATAATGCCCAAGTCCTACTTGAATCTAAAGAGTCAGTGCCTAGCAAATTTCTACAGTTCATGCAGAACCAAGGCATCCTTATAAATGTCACTGTCAATAACCGTATTGAGGTTTGGGACATAGAAAAGAAACTGTTGTCTGACGAGTACATTGTCAAAGAAGAAATCACTTGTTTTTCAGTCATTCAACATAGTCTCTTTATGTATATAGGACTTTCTAATGGTAATATTTCAGTTTTGATGCTTGATCAAGAACCATGGCATCTGGTACGGATGAAATACACCATACCCTTTTCAGCTTCTTATGGAAATTCAACTGAAGAATCTGATGATACTGTTGTGACACACATACTGCCTCAACCAGCAGCCGAGAGTCAGAGAGTTCTCATAATCTTTAAAAATGGCCAAATAATATTATGGGATATTCGAGAAAGCAGATCCATTTTCAGAACTGGTGGAAAAATGTTACAAACACGGTATAATGAAACAAAGAAAGTTTCTTCTGCATGCTGGGTGTGTCCTTTTGGAAGTAAGGTTGTTGTAGGGTACAACAATGGAGAGCTCTTCATTTGGAGCATCCCTTCTCTAAACACAGGAAATAGTTTAGCAACTGATTATAATAGTCAAAACACTCCTATGTTCAAATTTAACTTAGGATATAAATCAGACAAAACTTCCATAGGATCAGTAAAATGGATTTATGCTGAAGGAAAGGCTAGTCGATTATATGTCATGGGAGCTTCTGATTATGCCCCTTCAAACTTGTTGCAGGTAGTGTTGTTGAATGAGCATACAGAATCTCGCACAATTAAGATGGGGCTTCATTTGTCAGAAGGCTGTATTGACATGGAGATCATATCAACCTCAAGCAAGCATAAACAAAATTATTTCATTTTGATTGGGAAATCAGGCCATGTATATCTATATGATGATAATTTGATTGAAAGGTATCTACTGCAAAGCCAGTCTAAGTCCACTCCTTCACTGCCAAAGGAAGTGGTTGTGAAGTTACCACTGGCAGATTCAAGCATCACTACAGCGAAATTCATCTCCAACAATCCCAATTTGTTTAGTTCTGAAGATGAGTATTACAGTCAGCTGGTCAAGAATTATCCACCGCTTATTCCCATTGAAACAAACCTCAAAGATGGGATTAACTTCAGTTCTGCCAATTTCACTGGATTTTCAAACGTTAAAAACTTGTACATAACTGGACACAGCAACGGAGCCATAAATTTTTGGGATGCGTCATGTCCCTTTTTCACCCCAATTTTGCAATTAAAGCAACAGAGTGAAAATGATTTTTCTTTAAGTGGTATACCCTTGACGGAATTATATTTTGATAGCAACTCTCCACTACTTGTTTCTGGTGACCAAAGTGGAATGGTTCGTATCTATAGATTCAAACCTGAACCATATGCCTCCAATAGCTTCATGTCTCTTACTGGAGGTACGAGGAAAGGGACTGATCATGTAATCCATAGTATGAAACTTGTGAAGACTAGTGGTGCTGTAATTTGTATGAACATAGATCACAGCTCAAGGCATCTTGCTGTTGGTTCTGACCAAGGAAATGTTTTGGATGGACAAGGAGAACCAATCACAGGATCAGTTACAAAAGATGGCTTAGATTTGAGAAAAGGGAATCGTATTGAAGATGCAACAGCAAAGCAATTGTACATTTTGCTGTGTTCTGAGAAGGCTTTATATGTCTATTCTTGTGTGCATGCTGTACAGGGAGTTAAAAAGGTGCTTTACAAAAAGAAGTTTCATTCCTCTTCCTGTTGTTGGGCATCAACAATTTACAGCCACTCTGATATTAGTCTCGTACTCCTTTTCACCAGTGGAAAAGTAGAATTAAGGTCTTTGCCAGAGTTATATCTGATAGCGGAGACTTCAATTAGAGGTTTCACTTATTCACCTCCAAAACTCAAGTCATTTTCCGACAGCCAAATATGTTGTTCATCCAAAGGAGATCTTGTTTTGGTGAATGGTGATCAGGAGATTTTTGTTGTCTCATTGTTGGCCAAGAGGAATATTTTCAGGCTTTTGGACTCTGTTAGCTGCATCTACAGGAAGGAAAGGCTGCCATTACAAGAAGAGCTTGTTCCTGGCCCTATCATCCATAAGGAAAAGAAAAAGGGTATATTCAGCTCCGTTATCAAAGATTTTACTAGCAGTAAAGAAAAGCATGCGCCCCTTATGGAAAAAGAAGATCCCAAAGAAAGTATACGGGAACTCCCAGCAATATTCTCAAATGCAAACTTTGCAAGTAATGATAATGATGATAAGCTGACAGTGGATGAAAATCTTGAATTGAACATAGATGACATCGACCTAGAGGATCATGGAGAAAAACGCAAAGAACAAAGCATATTGGGAGCCCTTAATAAGAAGAAATTGGCTGGCACATTTCAGTCTCTGAAAGGAAGATTGAAAGAGATGAAGGGAAACAACCAAAAAACATCAGATAAGGAAGGTCATCAGGATGAAAAAGATGGTGCGCTTGATCAAATTAAGAAGAAATATGGATTTTCTTCTTCCTCCAATGAATCAACCGTTGCTAAACGGGCACAAATCAAGCTGCATGAAAACACAATGAAATTGCAGGGTACCAACCTTCGTGCCACCGAGATGCAAGATACAGCAAAATCATTTTCATCATTGGCAAAACAAGTGCTGCGAACTACTGAGCAGGATAGACGAAGTTGA 2916 0.3872 MFVKKLVEKASIKKPLGNSLDGLKANDVDPRLVFHQGVPSGGAKFAYDNIQKMLALSTKDGRIKLFGKDNAQVLLESKESVPSKFLQFMQNQGILINVTVNNRIEVWDIEKKLLSDEYIVKEEITCFSVIQHSLFMYIGLSNGNISVLMLDQEPWHLVRMKYTIPFSASYGNSTEESDDTVVTHILPQPAAESQRVLIIFKNGQIILWDIRESRSIFRTGGKMLQTRYNETKKVSSACWVCPFGSKVVVGYNNGELFIWSIPSLNTGNSLATDYNSQNTPMFKFNLGYKSDKTSIGSVKWIYAEGKASRLYVMGASDYAPSNLLQVVLLNEHTESRTIKMGLHLSEGCIDMEIISTSSKHKQNYFILIGKSGHVYLYDDNLIERYLLQSQSKSTPSLPKEVVVKLPLADSSITTAKFISNNPNLFSSEDEYYSQLVKNYPPLIPIETNLKDGINFSSANFTGFSNVKNLYITGHSNGAINFWDASCPFFTPILQLKQQSENDFSLSGIPLTELYFDSNSPLLVSGDQSGMVRIYRFKPEPYASNSFMSLTGGTRKGTDHVIHSMKLVKTSGAVICMNIDHSSRHLAVGSDQGNVLDGQGEPITGSVTKDGLDLRKGNRIEDATAKQLYILLCSEKALYVYSCVHAVQGVKKVLYKKKFHSSSCCWASTIYSHSDISLVLLFTSGKVELRSLPELYLIAETSIRGFTYSPPKLKSFSDSQICCSSKGDLVLVNGDQEIFVVSLLAKRNIFRLLDSVSCIYRKERLPLQEELVPGPIIHKEKKKGIFSSVIKDFTSSKEKHAPLMEKEDPKESIRELPAIFSNANFASNDNDDKLTVDENLELNIDDIDLEDHGEKRKEQSILGALNKKKLAGTFQSLKGRLKEMKGNNQKTSDKEGHQDEKDGALDQIKKKYGFSSSSNESTVAKRAQIKLHENTMKLQGTNLRATEMQDTAKSFSSLAKQVLRTTEQDRRS 971
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo8g01648 971 SUPERFAMILY WD40 repeat-like 48 594 IPR036322 GO:0005515
Pumo8g01648 971 CDD R-SNARE_STXBP5_6 906 966 - -
Pumo8g01648 971 FunFam Syntaxin-binding protein 5 isoform A 185 434 - -
Pumo8g01648 971 PANTHER LETHAL 2 GIANT LARVAE PROTEIN 9 594 - -
Pumo8g01648 971 MobiDBLite consensus disorder prediction 878 900 - -
Pumo8g01648 971 Gene3D - 447 760 IPR015943 GO:0005515
Pumo8g01648 971 Gene3D - 43 380 IPR015943 GO:0005515
Pumo8g01648 971 Pfam Lethal giant larvae(Lgl) like, C-terminal 592 751 IPR013905 -
Pumo8g01648 971 MobiDBLite consensus disorder prediction 882 900 - -
Pumo8g01648 971 FunFam Syntaxin-binding protein 5 isoform A 23 182 - -
Pumo8g01648 971 SUPERFAMILY WD40 repeat-like 361 746 IPR036322 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo8g01648 Pumo-Chr8 52117840 52128183 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo8g01648 - - gmx:100793138 1407.89
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo8g01648 8 52117840 52128183 Pumo8g01648 8 52117840 52128183 ECH