Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo8g01644 ATGTTATTATGTACGTATATTGAACAAGCAGCAACATCAAAATTTCTTAATTTGGTTGACCTGAATGCCACGAGTGAGAACTTCGGTTTTCGTGGGGAAGCTTTAGCTTCCATATCTGAAGTCTCTTTGCTGGAAATTGTGACAAGAACATATGGAAGGCCAAATGGATATCGAAAAGTATTGAAGGGGTGCAAGTGTTTATATCTTGGTATTGATGATGATAGAAAGGAAGTGGGCACCACAGTTGTTGTCCGTGATTTATTTTACAATCAACCAGTTCGGAGAAAATACATGCAATCCAGTCCCAATAAGGTACTGCAATCAATCAAGAAATGTGTAATGCGGCTTGCACTTGTGCGCCCAAATATTTCCTTCGAAGTTGTTGATATTGAAAGAGAGGATGAGCTCTTATGCACACATTCTGCTTCTTCTCCTCTGTCACTTGTCACCAGTGGCTTTGGGGTAGAGGTCACAAGCTCTCTTCACAATTTAGAAGTTGAGAATGATATCATAAAGCTTTCTGGATATATATCCGGTCCTTGCAATACTGTGAATACGAAGGCCTTGCAGTATGTCTATGTTAACTCACAATTTGTTTGCAAGGGCCCAATTCATAAGCTTGTGAGTCAACTGGCTATTAGGTTTGAGCATCTGAACTCATGGAATACTGATAAGGAGTTCCGAAACAAGAAGAGAACCAGGTGTCAACCATGTCCAGCTTATCTCTTGAATTTAAGTTGCCCCCAATCTTTGTATGATCTGGCCTTTGAGCCATCAAAAACTCATGTTAAATTCAAGGATTGGACTCCTATACTAAACTTCATTGAGAAGGCCATCAAACAATTCTGGGAGGAAAACATAGCTTGTGTAGAGCCCTCCAATCAAGCCACATACATGGTAGAAGATCAACAAGAGAAAGCAGATGTCAACATCATTTCAGCAGTATCAGATATGTCAAGGTTTAGAAACCAAAATCGTAAGGATTGCCTAGACCTCTTCTTTTCTACTTCAGACAATCTAATTGAAGATGACTATCATCAATCCTACAGGGAAGATATTAGAACATCTGTTGATTACTTAGGGGCCACAATGTTCAAAGAGCAACAAAGTAAGGGAGACTTTCTTCTTCAGACTGGTTATTCTGGCAACTTATTGGATGGTTCAAATGTCAAGTGCAAGTCCACTGTGATGAGAAAGCGTAACAGTTTGTTGATGCATGATAATAATAGTTTATTGGAAGGTGATAACTTTTTCGATAGTGAAATTCCTGCTGCAGAAAGTTTCAACATTGATGTACCTTTTGATGCACCAAGTTCTTCACATGGAAGAAGATTCCATAAAGTAGAAGCTAATGTGATCAATGAATCATTTGAAGATGATTTACTTTATAACTGCAGTGGGTATGATTATGATGTAAAGATTAATGGGGATTTGCAAAAACCTTTTCTAAAGAGATGCTCTACACTAGGAAGTATCCTGCATGAGAAGGCTTTGTTTGTAAATGATGAATATGAACTCCAAACTGATAGCTTTTGGAGCAAGCAGAATACGGAGGAGGATTATAGAAGTGGTAAGGATTTATATGCCCATCCCTATCCAGAAGTCACAAAAAAATTAAAGATGTCTAAAGATTCTGATTTCCTCGTTAGAGCGTTGGCCGAAGAAAATTGTCTCCCTCCAGATTCATGCTATTCAGCATCACAAATAGGAAGCTCTGGGTCAGATGATCAGTTGTTAAATTTTGAATGGCATCCTGTCTACCAAAAACCCTCATCTCAAGCATCTGCATTGGGTGTTTATCATACAACTGATATTAAAGATGACCTTGGAGGAGTATCTAGATACTATAAAAGGACCCATCATACAAAACATTTTGATGATAGAGAGACTGATTGCAAATTCAGCTACAATATGTCAAGGAATACCAACCAACATCGTCATGCATCAAGTTTTGCAAATATTGGATTTAATTTTGATCTTGCTGGTCATTGTGGTGAAATATTCAACAGACTAGTTGACGGGCCTGATTGCGGTGATATATATTCTACAAAAAGGTCAGATATTTTAAACAAGGAGCCAGACTGGCTGTTGCCCAAGTCATGTATTAAAAGCTGCAAGAGACCTAACAAAGGCAAAAGGGATCAATTTAGAAATTCAACTTTGGAGGAGAATCTTGAAAGATCTAGAAGAAGCTTTTCAGCTCCTCCTTTTCATAGAAGCAAAAGGAGGTTTTTCTCTTTAAATCATCCTTCAGAAATGATGGCCAAAAGACAGATAGGCCGAGTGTCCAACCCTGCTTTCAATCATCAAGAAGCTAGTAATTTTAAATATCCTCAACAGTCTCCCATTGCTCTTCACAAAAGCACTGAAGATTTCTTATTGCAAGAATTCAAAATTAATGTGAAACAAACTTCAGAGGTTCTGGGAGATATGCAAGTTAATGACATTACAGAGATTGATGGATTTGAAAGTTTCAACATTCAAAACAGTGCTCCATTTGGGGAATTGGTCTCTAGGGATGTGCAAGATTCCATAGATTACGGGACTAAATGGAGGAACTGCTCACCCAAAATTACAAATGATAAACTGGCTAATATTCAAAGTCAAAACAATATACTTGACATTTCTTCTGGATTCTTGCATCTTGCTGGAGACTCGTTGATTCCTGAAACTATCAGTAAGAAATGCCTTGAGGGTGCTAAAGTTCTGCATCAGGTGGATAAAAAATTCATACCAGTCGTGGCTGGCAGAACCCTTGCTGTTATTGATCAGCATGCTGCAGATGAAAGAATCAGACTGGAAGAATTGCGTCAAAAGGTATTGTCAGGAGAAGCAAAAGCAATAACCTATCTAGATGCTGAACAGGAACTGGTATTGCCAGAGATTGGTTTTCAACTACTTCATAGTTATAGTGAACAGATTAAAGATTGGGGCTGGATCTGCAACATTCATACTCAAAATTCTGAATCCTTTAGAAGGAACTTGGATATTCTCAACAGACCACAAATGGCTGTCACACTTATTGCGGTACCGTGTATTTTAGGGGTCAAATTAAATGATGTTGATCTTTTAGAATTTCTTCAGCAGCTTGCTGACACTGATGGATCATCAACAATGCCACCCTCTGTCATACGAGTGCTAAATTTGAAAGCATGCAGAGGTGCAATTATGTTTGGGGATTCATTGCTCCCATCAGAATGTTCCCTTCTAGTTGAAGAGCTAAAGCATATATCGCTTTGTTTCCAATGTGCTCATGGGCGACCAACAACTGTTCCTCTAGTCAACTTGGAGGCACTGCATAATCAGATAGCCAAGCTTCGACTGATGAACGAGTGTTCAAGAGACGAGTGGCATGGATTACATAGACATAAAGTATGCGTGGAACGTGCAGCACAGCGTTTAAATTCTGCTAGAGGAATTTGA 3423 0.388 MLLCTYIEQAATSKFLNLVDLNATSENFGFRGEALASISEVSLLEIVTRTYGRPNGYRKVLKGCKCLYLGIDDDRKEVGTTVVVRDLFYNQPVRRKYMQSSPNKVLQSIKKCVMRLALVRPNISFEVVDIEREDELLCTHSASSPLSLVTSGFGVEVTSSLHNLEVENDIIKLSGYISGPCNTVNTKALQYVYVNSQFVCKGPIHKLVSQLAIRFEHLNSWNTDKEFRNKKRTRCQPCPAYLLNLSCPQSLYDLAFEPSKTHVKFKDWTPILNFIEKAIKQFWEENIACVEPSNQATYMVEDQQEKADVNIISAVSDMSRFRNQNRKDCLDLFFSTSDNLIEDDYHQSYREDIRTSVDYLGATMFKEQQSKGDFLLQTGYSGNLLDGSNVKCKSTVMRKRNSLLMHDNNSLLEGDNFFDSEIPAAESFNIDVPFDAPSSSHGRRFHKVEANVINESFEDDLLYNCSGYDYDVKINGDLQKPFLKRCSTLGSILHEKALFVNDEYELQTDSFWSKQNTEEDYRSGKDLYAHPYPEVTKKLKMSKDSDFLVRALAEENCLPPDSCYSASQIGSSGSDDQLLNFEWHPVYQKPSSQASALGVYHTTDIKDDLGGVSRYYKRTHHTKHFDDRETDCKFSYNMSRNTNQHRHASSFANIGFNFDLAGHCGEIFNRLVDGPDCGDIYSTKRSDILNKEPDWLLPKSCIKSCKRPNKGKRDQFRNSTLEENLERSRRSFSAPPFHRSKRRFFSLNHPSEMMAKRQIGRVSNPAFNHQEASNFKYPQQSPIALHKSTEDFLLQEFKINVKQTSEVLGDMQVNDITEIDGFESFNIQNSAPFGELVSRDVQDSIDYGTKWRNCSPKITNDKLANIQSQNNILDISSGFLHLAGDSLIPETISKKCLEGAKVLHQVDKKFIPVVAGRTLAVIDQHAADERIRLEELRQKVLSGEAKAITYLDAEQELVLPEIGFQLLHSYSEQIKDWGWICNIHTQNSESFRRNLDILNRPQMAVTLIAVPCILGVKLNDVDLLEFLQQLADTDGSSTMPPSVIRVLNLKACRGAIMFGDSLLPSECSLLVEELKHISLCFQCAHGRPTTVPLVNLEALHNQIAKLRLMNECSRDEWHGLHRHKVCVERAAQRLNSARGI 1140
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo8g01644 1140 Pfam MutL C terminal dimerisation domain 901 1062 IPR014790 GO:0005524|GO:0006298
Pumo8g01644 1140 Gene3D - 150 290 IPR014721 -
Pumo8g01644 1140 SUPERFAMILY DNA mismatch repair protein MutL 901 1093 IPR037198 -
Pumo8g01644 1140 Pfam DNA mismatch repair protein, C-terminal domain 153 282 IPR013507 GO:0005524|GO:0006298|GO:0030983
Pumo8g01644 1140 SMART DNA_mis_repair_2 149 284 IPR013507 GO:0005524|GO:0006298|GO:0030983
Pumo8g01644 1140 SMART MutL_C_2 902 1062 IPR014790 GO:0005524|GO:0006298
Pumo8g01644 1140 SUPERFAMILY Ribosomal protein S5 domain 2-like 134 284 IPR020568 -
Pumo8g01644 1140 Gene3D - 898 978 IPR042120 -
Pumo8g01644 1140 Gene3D - 1044 1107 IPR042120 -
Pumo8g01644 1140 PANTHER DNA MISMATCH REPAIR PROTEIN MLH, PMS, MUTL 4 1098 IPR038973 GO:0006298|GO:0016887|GO:0032300|GO:0140664
Pumo8g01644 1140 Coils Coil 1096 1116 - -
Pumo8g01644 1140 SUPERFAMILY ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 10 135 IPR036890 -
Pumo8g01644 1140 ProSitePatterns DNA mismatch repair proteins mutL / hexB / PMS1 signature. 29 35 IPR014762 -
Pumo8g01644 1140 Gene3D - 3 143 IPR036890 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo8g01644 Pumo-Chr8 52079851 52088788 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo8g01644 K08739 - gmx:100788019 2098.94
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo8g01644 8 52079851 52088788 Pumo8g01644 8 52079851 52088788 ECH