Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo8g01598 ATGGTCCCAAAACCAATCATAGTGACAACACCACCGGCGTCTTCTGCACCCTCTCCACCCCTCAACGCAGTTTCACCCCTCAGAACAGAAGAAAAACCCCAGACACAAACCTTAAGAACCACCACATCCACTCCTCAAAATGTTAAAACCAAACAAAGCCCATCCATCAAAACGACGCCGCAGCAGCGCGTGGAACTAAAAAGAAAAACAACAAACTCATGGGTACCCGCACTAATGCTAAACGCATTCGACGACATCATCAACAACTTCATAGATCCTCCACTCAAACCCTCCATAGATCCACGCCACGTGTTATCGCAAAACTTCGCCCCCGTGGACGAGCTCCCTCCGACGGCGTGCGAAGTGATACAAGGCTCCCTCCCGCCGTGCCTCGACGGCGCGTACATCAGAAACGGCCCCAACCCTCAGTTCCTCCCGCGTGGACCCTACCACCTCTTCGACGGAGACGGTATGCTCCACGCGCTACGCATCACACAAGGCAAACCCACGCTCTGTAGCCGCTACGTCAAAACGTACAAATACACCCTCGAAAACGACGCCGGATTCCCTCTCATCCCCAACGTCTTCTCCGGCTTCAACTCCCTCGTGGCCTCCGCCGCACGTGGGTCCCTCACCGCGGCACGTGTCTTGACGGGACAGTTTGACCCCACTAACGGCATTGGGTTGGCCAACACCAGCTTAGCCTTCTTCGGTAACCGTCTCTTCGCCCTGGGCGAGTCCGACCTCCCTTACGCCGTCAATCTAACCCCTGACGGCGACATCGAAACGATCGGCCGTCACGACTTTGACGGAAAACTCACGTTCAGCATGACGGCGCACCCTAAGATAGACCCCGACACAGGGGAATGCTTCGCCTTCCGTTACGGCCCCGTGCCACCGTTCCTCACCTACTTCAGTTTCGACCCTAACGGGAAAAAACACGACGACGTGCCTATCTTCTCCATGCCAACACCTTCGTTCCTCCACGACTTCGCCATCTCGAAGAATTACGCGATCTTCTGTGACATTCAGCTCGGAAGTGAACCCTCTCGACATGATCAACGGTGGCTCCCCCGTCGGTTCCGTCGCCTCCAAGGTCCCAAGGATCGGAATCCTCCCTCGTGA 1125 0.56 MVPKPIIVTTPPASSAPSPPLNAVSPLRTEEKPQTQTLRTTTSTPQNVKTKQSPSIKTTPQQRVELKRKTTNSWVPALMLNAFDDIINNFIDPPLKPSIDPRHVLSQNFAPVDELPPTACEVIQGSLPPCLDGAYIRNGPNPQFLPRGPYHLFDGDGMLHALRITQGKPTLCSRYVKTYKYTLENDAGFPLIPNVFSGFNSLVASAARGSLTAARVLTGQFDPTNGIGLANTSLAFFGNRLFALGESDLPYAVNLTPDGDIETIGRHDFDGKLTFSMTAHPKIDPDTGECFAFRYGPVPPFLTYFSFDPNGKKHDDVPIFSMPTPSFLHDFAISKNYAIFCDIQLGSEPSRHDQRWLPRRFRRLQGPKDRNPPS 374
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo8g01598 374 Pfam Retinal pigment epithelial membrane protein 110 346 IPR004294 GO:0016702
Pumo8g01598 374 MobiDBLite consensus disorder prediction 1 63 - -
Pumo8g01598 374 MobiDBLite consensus disorder prediction 28 63 - -
Pumo8g01598 374 MobiDBLite consensus disorder prediction 1 19 - -
Pumo8g01598 374 PANTHER BETA-CAROTENE DIOXYGENASE 112 345 IPR004294 GO:0016702
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo8g01598 Pumo-Chr8 51243735 51245067 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo8g01598 K09840 - gmx:100777875 608.601
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo8g01598 8 51243735 51245067 Pumo8g01598 8 51243735 51245067 ECH