Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo8g01577 ATGGGCTCCCAGGGCCAGTCCAAGGAGTTTCTGGACCTCATCAAGTCCATCGGCGAGGCCCGATCCAAGGCCGAGGAGGACCGCATCGTCCTCTGCGAGATCGACACCCTCAAGCGACGCATCAACGACGCCGACGTGCCGAAACGCAAGATGAAGGAGTACATCATCCGCCTCCTCTACGTCGAGATGCTCGGCCACGACGCGTCGTTCGGCTACATCCACGCCGTGAAAATGACTCACGACGACGCTCTCCTCCTCAAGCGCACCGGCTACCTCGCCGTCACGCTCTTCCTCAGCGACGACCACGACCTCATCATCCTCATCGTCAACACCATCCAGAAGGACCTCGCATCGGATAACTACCTCGTCGTTTGTGCCGCGCTTAACGCCGTTTGCAGGCTTATTAACGAGGAAACCATCCCCGCCGTGCTTCCACGTGTCGTCGAGCTGCTTAATCACTCCAAGGACGCCGTTAGGAAAAAGGCCGTTATGGCGCTGCAGCGGTTTTATCTGAAATCTCCGTCCTCCGTTTCGCATTTGCTTTCTAATTTTCGTAAGCGGTTGTGCGATAATGATCCTGGAGTAATGGGCGCTTCTCTCTGCCCTCTGTTTAATCTCGTTTCCGATGATGTTAACTCTTATAAGGACCTTGTCGTTAGCTTTGTTAACATTCTTAAACAAGTTGCAGAACATAGGTTGCCGAAGACTTATGATTATCACCAAATGCCTGCACCCTTCATTCAGATTAAGTTGCTGAAAATTCTTGCACTACTGGGAAGTGGCGACAAGCAAGCTAGTGGACACATGTACACTGTGCTTGGTGATATAATTAGGAGGAGTGATTCGGTGACCAATATAGGGAATGCTGTTCTCTATGAGTGTATATGCTGTGTTGCTTCTATATATCCTAATCCTAAGTTATTAGAGGCTGCAGCAGATGTGATTGCTAAATTTTTGAAGAGTGACAGTCATAATCTCAAGTACATGGGCATTGATGCTCTTGGTCGGTTGATAAAGTTAAGTCCACATATTGCAGAACAACACCAACTGGCCGTCATTGACTGCTTAGAGGACCCTGATGATAGTATGAAACGAAAAACTTTTGAACTGTTATATAAAATGACCAAGTCCTCCAATGTGGAAGTGATTGTTGACAGAATGATTGATTACATGATTAGCATAAGTGATGACCATTATAAAACCTATATAGCATCTCGATGTGTGGAACTTGCTGAGCAATTTGCACCAAGTAATCATTGGTTTATACAGACCATGAATAAAGTTTTTGAGCATGCTGGAGATCTTGTTAATATTAAGGTGGCACATAATTTGATGCGGTTGATTGCTGAAGGATTTGGAGAGGACGATGATGCTGCAGATAGTCAGTTGAGATCATCTGCTGTCGAGTCATATTTGCGCATTATTGGAGAGCCAAAGCTTCCATCTGTGTTTCTTCAAGTCATCTGTTGGGTTCTGGGGGAATATGGAACAGCGGATGGAAAGTATTCTGCTTCCTATATCAGTGGGAAGTTGTGTGACATTGCAGAGGCATATTCTAATGATGAAAATGTTAAGGCTTATGCAATTTCAGCATTGATGAAAATTTATGCGTTTGAAGTAGCAGCTGGGAGGAAAGTGGATATCCTATCTGAGTGTCAATCTTTGATTGAAGAATTATTGGCATCCCATTCTACAGATTTGCAGCAACGTGCTTATGAATTGCAAGCCCTTATAGGTTTGGATGCACAAGCTGTTGAAACAATAATGCCACGAGATGCAAGTTGTGAAGACATTGAGGTTGATAAGAATCTTTCTTTCCTCAATGGGTATGTTCAGCAGTCTCTAGAAAGGGGTGCTCAATCCTATATTCCTGAGGATGTGCGAACTGGAATGGGGAATATGAACGATTTCAGAAGCCAAGATCATCATGAATCTTTGCAGCATGGTCTAAGATTTGAGGCATATGAAGTTCCAAAGCCTCCAATGCAACCGAAAGTTACTCCAGTTTCATTTGCATCCTCAGCAGACATTGTTCCAGTACCTGAGCCATTGTCTTCCAGGGAGACCCACCATATCTCATCAGTGGGATCAACATCAGAGGCTGGATCATCAGAGCTTAAGCTACGACTTGATGGTGTTCAGAAGAAGTGGGGTAGGCCAACATATTCGTCTGCAACATCATCTGCTTCTGCCTCTGCCTCGTATTCTACTTCCCAAAAACCAACAAATGGGGCAACTCAGGCAGATGGTGCTACAGCTGTCAATTCAAAAGTGCGTGATAGTTATGATTCAAGAAAGACACAGGTTGAGATTAATCCAGAAAAGCAGAGGCTTGCCGCTTCATTGTTTGGTGGTTCAACTAAACCTGATAAAAGATCATCTACTAGTCATAAGGTTCCAAAATCTAGTGTAAGTGCTAGTGCTGCTGACGGATCTCAGGGATCAAAGGCTGCTGTTGTGCCCAATGAAGTAGCTGTGGGAAAAACAATTCCTCAACCACCTGATTTGCTTGACTTGGGTGAACCAACTGTCACTACAGCTCCTCCTTCTGTGGTGGATCCATTCAAGGAATTGGAAGGACTTCTTGACCCAAGCACTAATTCTGCAACAAATCATAATGTAGGTGCTGCTACAAACGCCCCTGATATTATGTCACTCTATGCGGAGACTACTGCCAGTGGTGGCTATTCTATACCTGTGAGTGGGGATAATGTAAATCTTTTATCTGAATTGTCAAATGCAGCTGTAAAAGCTACTAGTGGAGAAACAATCGCGTCGCCTTTGTCCCAATCTATTAAGGGTCCAAATGCTAAAGATTCTTTGGATAAGGATACACTAGTGAGGCAGATGGGTGTGAACCCCTCAAGTCAGAATCCTAACTTGTTTAGTGACTTGCTCGGCTAG 2904 0.4487 MGSQGQSKEFLDLIKSIGEARSKAEEDRIVLCEIDTLKRRINDADVPKRKMKEYIIRLLYVEMLGHDASFGYIHAVKMTHDDALLLKRTGYLAVTLFLSDDHDLIILIVNTIQKDLASDNYLVVCAALNAVCRLINEETIPAVLPRVVELLNHSKDAVRKKAVMALQRFYLKSPSSVSHLLSNFRKRLCDNDPGVMGASLCPLFNLVSDDVNSYKDLVVSFVNILKQVAEHRLPKTYDYHQMPAPFIQIKLLKILALLGSGDKQASGHMYTVLGDIIRRSDSVTNIGNAVLYECICCVASIYPNPKLLEAAADVIAKFLKSDSHNLKYMGIDALGRLIKLSPHIAEQHQLAVIDCLEDPDDSMKRKTFELLYKMTKSSNVEVIVDRMIDYMISISDDHYKTYIASRCVELAEQFAPSNHWFIQTMNKVFEHAGDLVNIKVAHNLMRLIAEGFGEDDDAADSQLRSSAVESYLRIIGEPKLPSVFLQVICWVLGEYGTADGKYSASYISGKLCDIAEAYSNDENVKAYAISALMKIYAFEVAAGRKVDILSECQSLIEELLASHSTDLQQRAYELQALIGLDAQAVETIMPRDASCEDIEVDKNLSFLNGYVQQSLERGAQSYIPEDVRTGMGNMNDFRSQDHHESLQHGLRFEAYEVPKPPMQPKVTPVSFASSADIVPVPEPLSSRETHHISSVGSTSEAGSSELKLRLDGVQKKWGRPTYSSATSSASASASYSTSQKPTNGATQADGATAVNSKVRDSYDSRKTQVEINPEKQRLAASLFGGSTKPDKRSSTSHKVPKSSVSASAADGSQGSKAAVVPNEVAVGKTIPQPPDLLDLGEPTVTTAPPSVVDPFKELEGLLDPSTNSATNHNVGAATNAPDIMSLYAETTASGGYSIPVSGDNVNLLSELSNAAVKATSGETIASPLSQSIKGPNAKDSLDKDTLVRQMGVNPSSQNPNLFSDLLG 967
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo8g01577 967 PIRSF AP4_epsilon 682 826 IPR017109 GO:0015031|GO:0030124
Pumo8g01577 967 PIRSF AP4_epsilon 886 967 IPR017109 GO:0015031|GO:0030124
Pumo8g01577 967 PIRSF AP4_epsilon 1 682 IPR017109 GO:0015031|GO:0030124
Pumo8g01577 967 Pfam Adaptin N terminal region 38 579 IPR002553 GO:0006886|GO:0016192|GO:0030117
Pumo8g01577 967 MobiDBLite consensus disorder prediction 718 850 - -
Pumo8g01577 967 PANTHER ADAPTIN, ALPHA/GAMMA/EPSILON 12 801 - -
Pumo8g01577 967 MobiDBLite consensus disorder prediction 687 704 - -
Pumo8g01577 967 SUPERFAMILY ARM repeat 24 622 IPR016024 -
Pumo8g01577 967 MobiDBLite consensus disorder prediction 798 812 - -
Pumo8g01577 967 Gene3D - 2 592 IPR011989 -
Pumo8g01577 967 MobiDBLite consensus disorder prediction 680 706 - -
Pumo8g01577 967 MobiDBLite consensus disorder prediction 719 758 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo8g01577 Pumo-Chr8 51011410 51020259 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo8g01577 K12400 - gmx:100819573 1719.13
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo8g01577 8 51011410 51020259 Pumo8g01577 8 51011410 51020259 ECH