Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo8g01568 ATGGAGGACAGAACTATGGGAAGAAACGGTAGCTTTAGGTTGGGGTTGGGAATGGATGGGAAAAAAGATCACAGTGTGGTTGAGCTTGGTAGTATTGACACACAGAGACTTCTTCTAAGCGGTGGAGAGAGAGAGAAAAAATTGCAACCTCTCACAAACTCTCTCTCTCCAAGGCAAATGAAAGCCCTCACAGCTCTCTGTGACACTATCTTACCCTCTGTCGACCACTTTGTTGACACTTCCGATGAATCTCTCACTAAATTCTATCAGATTTCAGCTTCCATGTCCGGAACACCTCAACGTTTTGGGGGTATGATATGTGAGAAATTGAAACACCCCATGACAGGGTTACTGAAGTTTGTGCTATGGCTGTTGTCTACGTGGTTTGGAACATTAATTTTCTGTGGCATGGGATGCCTCTCAACCCAATTCCCCTTCATCCACAGCTATCCTGACTTGTCTCTTCAGAAACGCCAAGAGATTATGCGATCATGGTCTCTCAGTTACATTCGTCACTTTAGAATGCTCTTCAGGACCGTCAAACTTCTCACTCTCCTAATCTTCTTTACTCAGATAGATGAATCAGAAGACAACGTTGCATGGAAAGCAATTGGATATTGTGGACCTGATCCAGAATTCAAAGCTCAGTTGAAGAGCCACTTTTTAGATGGAAAATCTAAAGGAGGACAAGAGGATAAGGAAGATGAAGATGCTGAAGAGGTGATAGGACCCCTTTACAAAGGTCTAGTCCATCTGAATTACCCACGAGACATCACTGCAGATGCTCTAAGAGGATTTGGATTCCCTGTATCAGTCATTCGTAGGAAGCATAAAGCTGCTGCAAACTTGTCATCTCCTTCTTTGGTGATACAATGTGATGCGGTGGTAGTTGGTTCTGGCTCAGGAGGTGGAGTGATAGCTGGTGTTCTAGCAAAAGCTGGTTACAAAGTGTTGGTGTTGGAGAAAGGAGGCTATTCTGCTAGGAACAATCTTTCTCTTCTTGAAGGACCAACCATGGATCAAATGTACCTCAATGGTGGTTTGGTTGCAAGTGATGATATGGGTGTGTTTATTCTATCAGGATCCACTGTTGGTGGAGGGTCAGCAATCAACTGGTCTGCATGCATTAAAACCCCTCAGCATGTGTGCAAGGAGTGGTGTGATAAACATGGGCTAGAGTTGTTTGAGAGTGAATTGTATAGAGAAGCCTTGGATGCTGTCTGTGAGAAGATGGGAGTTCAATCTGAGATTGAAGATGAAGGATTCAACAATGCAATACTAAGAAAAGGGTGTCAAGAAATGGGGTATCCTGTTAGTAACATTCCTAGGAATTCTACATCAGATCACTACTGTGGCTGGTGTTGCATGGGTTGTAAGGATGGGAGGAAGAAGGGTACCTCAGAAACATGGTTGGTGGACTTGGTGAAATCTGGCAATGGAGCCATTCTTCCAGGTTGTGAGGCAATAAAAGTCTTGCACAAGAAAAAGGAAGGGAAGGATAGAAAGATTGCACGTGGGGTGGCTTTTGAATTTGAATATAAAGGGACTAAAGACATTTGTGTGGTGGAGTCCAAGGTCACAATTGTAGCATGTGGAGCACTGAGTACTCCAGCATTGCTCAAAAGAAGTGGCTTGAGGAATCAGAACATAGGGAGGAACTTGCATCTTCATCCGGTGACAATGGCTTGGGGCTACTTCCCAGATGCACCTGCATCTGAGGTGTGGCCAGAGGCACATAAGAAGAGCTATGAAGGAGGGATAATGACAGCAATGTCTCCGGTTGTTGCGGGGTTTGAACAATCTGGATATGGTGCAGTGATCCAAACACCTTCATTGCATCCTGGTATGTTCTCAATTGTCACACCATGGACTTCTGGAATTGATATAAGAGATCGAATGCGGAAGTTTTCTAGAACGGCTCATATATTTGCACTGGCAAGGGATCAAGGATCAGGGACTGTGGAAACGCCAAAATGTATTAGTTATAAGCTAGCAAGTGTAGATGAAGAGCATTTACAGAAAGGAATTGATAAGGTGCTGAGAATTCTGGCAGCAGCTGGAGCTGAAGAAATTGGGACACATCATAATAAGGGAAGGACCTTAAATGTAAAGCAAGTGAGCTATAATGAATTTGAGAAATTTGTTAAGGAGGAAAGTTCAAGGCCATTGACAGACCTTACAACACCATTGTGCTCAGCACATCAGATGGGGAGTTGCCGGATGGGTTCTAATCCAAAGCAATCAGTGGTGAATCAAACAGGAGAGACATGGGAAGTGGAAGGCCTTTATGTGGCTGATTCAAGTGTCTTCCCCACAGCTTTGGGTGTGAATCCAATGGTCACTGTTCAAGCTATTGCTTATTGCACAGCACAATCTGTTGTTGAAGTTCTTAGAAGGAAAAGAAGTAAATGA 2412 0.4386 MEDRTMGRNGSFRLGLGMDGKKDHSVVELGSIDTQRLLLSGGEREKKLQPLTNSLSPRQMKALTALCDTILPSVDHFVDTSDESLTKFYQISASMSGTPQRFGGMICEKLKHPMTGLLKFVLWLLSTWFGTLIFCGMGCLSTQFPFIHSYPDLSLQKRQEIMRSWSLSYIRHFRMLFRTVKLLTLLIFFTQIDESEDNVAWKAIGYCGPDPEFKAQLKSHFLDGKSKGGQEDKEDEDAEEVIGPLYKGLVHLNYPRDITADALRGFGFPVSVIRRKHKAAANLSSPSLVIQCDAVVVGSGSGGGVIAGVLAKAGYKVLVLEKGGYSARNNLSLLEGPTMDQMYLNGGLVASDDMGVFILSGSTVGGGSAINWSACIKTPQHVCKEWCDKHGLELFESELYREALDAVCEKMGVQSEIEDEGFNNAILRKGCQEMGYPVSNIPRNSTSDHYCGWCCMGCKDGRKKGTSETWLVDLVKSGNGAILPGCEAIKVLHKKKEGKDRKIARGVAFEFEYKGTKDICVVESKVTIVACGALSTPALLKRSGLRNQNIGRNLHLHPVTMAWGYFPDAPASEVWPEAHKKSYEGGIMTAMSPVVAGFEQSGYGAVIQTPSLHPGMFSIVTPWTSGIDIRDRMRKFSRTAHIFALARDQGSGTVETPKCISYKLASVDEEHLQKGIDKVLRILAAAGAEEIGTHHNKGRTLNVKQVSYNEFEKFVKEESSRPLTDLTTPLCSAHQMGSCRMGSNPKQSVVNQTGETWEVEGLYVADSSVFPTALGVNPMVTVQAIAYCTAQSVVEVLRRKRSK 803
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo8g01568 803 PANTHER LONG-CHAIN-ALCOHOL OXIDASE 52 802 - -
Pumo8g01568 803 Gene3D - 277 600 IPR036188 -
Pumo8g01568 803 Pfam GMC oxidoreductase 293 559 IPR000172 GO:0016614|GO:0050660
Pumo8g01568 803 SUPERFAMILY FAD/NAD(P)-binding domain 290 794 IPR036188 -
Pumo8g01568 803 Pfam GMC oxidoreductase 661 788 IPR007867 GO:0016614
Pumo8g01568 803 PIRSF Lg_Ch_AO 43 803 IPR012400 GO:0046577
Pumo8g01568 803 Gene3D - 717 800 IPR036188 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo8g01568 Pumo-Chr8 50923638 50931815 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo8g01568 22 797 Acyl Lipid Metabolism Gene Families AT4G19380 56.594 0.0 848
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo8g01568 K17756 - gmx:100775376 1515.36
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo8g01568 8 50923638 50931815 Pumo8g01568 8 50923638 50931815 ECH