Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo8g01546 ATGATGATGATGATGATGAGCCGCGGTGGCCCCAACCGTGTGGCTAACACTGCACTGTTGGTGGCGAAGGGTTTAAGCGGTGAAGTTGGTGGTGTGAGAGCATTTTATGGCGGTGGTTTGAGGAGTGAGAGCACTCTGGCTTTGTCAGAGAAGGAAAAGATGGAGAAGAAGGCTGATTTGCCTTCTGCTGGAGGGAACAAAGAGGAAAAAGGGATCGTGAGTTATTGGGGCATTGAACCCTCTAAGATCACCAAAGAAGATGGCACTGAATGGAAGTGGAATTGCTTTAAGCCATGGGAGACATACAAAGCAGATCTTTCGATTGATCTGCAGAAGCACCATGCCCCGACCACTTTTCTGGACAAAATGGCTTTTTGGACTGTCAAGGCTCTCAGATACCCCACCGATGTGTTTTTCCAGAGGCGATATGGATGCCGAGCAATGATGCTTGAGACAGTGGCTGCAGTTCCTGGGATGGTAGGAGGCATGCTACTGCACTGCAAATCCCTCAGAAGGTTTGAGCACAGTGGTGGTTGGATCAAAGCACTGCTGGAAGAAGCAGAGAATGAGCGTATGCACCTAATGACCTTCATGGAAGTGGCAAAGCCAAGGTGGTACGAGCGTGCACTAGTGATAACTGTGCAAGGTGTTTTCTTCAATGCATACTTCTTGGGGTATTTGCTGTCACCTAAATTTGCGCACCGCATGGTTGGTTACCTTGAGGAGGAGGCAATTCACTCCTACACAGAGTTTCTTAAGGAGCTGGACAAGGGCAATATAGAAAATGTGCCAGCTCCAGCCATTGCCATTGACTACTGGCAGCTCCCACCAGACTCTACTCTAAGGGATGTTGTCATGGTTGTCAGAGCTGATGAGGCACACCATCGCGATGTCAACCACTTTGCATCGGACATACACTACCAAGGGCGAGAGTTGAGAGAGGCTGCTGCTCCAATTGGTTATCACTAA 969 0.4912 MMMMMMSRGGPNRVANTALLVAKGLSGEVGGVRAFYGGGLRSESTLALSEKEKMEKKADLPSAGGNKEEKGIVSYWGIEPSKITKEDGTEWKWNCFKPWETYKADLSIDLQKHHAPTTFLDKMAFWTVKALRYPTDVFFQRRYGCRAMMLETVAAVPGMVGGMLLHCKSLRRFEHSGGWIKALLEEAENERMHLMTFMEVAKPRWYERALVITVQGVFFNAYFLGYLLSPKFAHRMVGYLEEEAIHSYTEFLKELDKGNIENVPAPAIAIDYWQLPPDSTLRDVVMVVRADEAHHRDVNHFASDIHYQGRELREAAAPIGYH 322
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo8g01546 322 FunFam Ubiquinol oxidase 75 319 - -
Pumo8g01546 322 Gene3D Alternative oxidase 73 318 IPR038659 -
Pumo8g01546 322 PANTHER ALTERNATIVE OXIDASE 42 322 IPR002680 GO:0009916
Pumo8g01546 322 Pfam Alternative oxidase 112 302 IPR002680 GO:0009916
Pumo8g01546 322 CDD AOX 139 306 IPR002680 GO:0009916
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo8g01546 Pumo-Chr8 50275773 50280529 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo8g01546 32 322 Miscellaneous Gene Families AT3G22370 81.848 0.0 524
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo8g01546 K17893 - gmx:547924 624.394
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo8g01546 8 50275773 50280529 Pumo8g01546 8 50275773 50280529 ECH