Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo8g01493 ATGAATCGCCACCACGATCCCAATCCATTCGACGAAGAAGAAGTCAATCCTTTCTCGAAAGGCGCTGCTGCTCCTGCATCAAAATCACGTATTCCACCAATAGCATCTGAGCCACTGAGCTATGGTCAAAGACATGATGCTACAGTTGATATTCCTTTGGATACTATAAATGACTCCAAGAAAAAGGGTCAAGAGCTAGCAGCTTGGGAAGCAGATTTAAAACGGAGAGAGAAGGAAATAAAAAGAAGAGAAGAGGCTGTTTCTAGAGCTGGTGTTCCTGTTGATGATAAGAATTGGCCTCCATTTTTCCCAATCATTCACCATGATATTGCCAATGAGATACCGGTTCATGCTCAGAGGCTGCAATATTTGGCCTTTGCAAGTTGGTTAGGAATTGTTCTCTGCCTAGTTTTTAATGTAGTCGCTGTGATTGTCTGTTGGATCAGAGGCGGCGGTGTTAAAATTTTTTTCCTTGCGGTTATATATGCTCTACTTGGTGTTCCCCTTTCATATGTTCTTTGGTACAGGCCCCTCTATCGTGCTATGAGGACGGACAGTGCACTGAAGTTTAGTTGGTTTTTCTTGTTCTACTTGCTTCATATTGCATTTTGCATCTTTGCTGCAATTGCGCCTCCAGTTGTTTTTCATGGAAAATCATTAACGGGCATCCTTGCTGCAATTGATGTCTTCTCAGACCATGTATTGGTTGGGATATTCTATTTGATTGGATTTGGCATGTTTTGCTTGGAGGCTCTTCTAAGCTTATGGGTACTTCAGAAAATATACTTGTATTTCCGGGGGAATAAGTGA 810 0.4198 MNRHHDPNPFDEEEVNPFSKGAAAPASKSRIPPIASEPLSYGQRHDATVDIPLDTINDSKKKGQELAAWEADLKRREKEIKRREEAVSRAGVPVDDKNWPPFFPIIHHDIANEIPVHAQRLQYLAFASWLGIVLCLVFNVVAVIVCWIRGGGVKIFFLAVIYALLGVPLSYVLWYRPLYRAMRTDSALKFSWFFLFYLLHIAFCIFAAIAPPVVFHGKSLTGILAAIDVFSDHVLVGIFYLIGFGMFCLEALLSLWVLQKIYLYFRGNK 269
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo8g01493 269 Coils Coil 66 86 - -
Pumo8g01493 269 MobiDBLite consensus disorder prediction 1 45 - -
Pumo8g01493 269 Pfam SCAMP family 97 267 IPR007273 GO:0015031|GO:0016020
Pumo8g01493 269 PANTHER SECRETORY CARRIER-ASSOCIATED MEMBRANE PROTEIN SCAMP 5 268 IPR007273 GO:0015031|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo8g01493 Pumo-Chr8 49528438 49534575 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo8g01493 1 269 Miscellaneous Gene Families AT1G32050 76.384 2.18e-156 434
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo8g01493 K19995 - gmx:100806586 511.146
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo8g01493 8 49528438 49534575 Pumo8g01493 8 49528438 49534575 ECH