Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo8g01421 ATGGCTTCTAAATTCAAGCATGGATCCTCTATGGTTCGGAAGATCACGCAGCTGAGCAACGATATGGATCAGGAGGAGGGTGAGAATGGGAGTGTTGGTCTTGCTACCTACATGGTTCACATTCCTCCAACACCTGATAACCAGCCTATTGAGATTGCTCTGGAGAGGTCGAATTCTCGGAGGGTGGAGGACCAATACGCTTCTAGTTCTATGTTCACCGGTGGTTTCAACCAGCTCACACGTGCCCATTTGAAGGACAAGGTGATCGAGTCCGAGTCCAGCCACCCCCAGATGGCTGGTGCAAAAGGGTCCTCATGTCAAGTGCCTGGGTGTGATGGAAGGGTCATGACCGATGAGAGGGGGTTGGATGTGCTCCCTTGTGAGTGTGATTACAAAATTTGCAGGGATTGTTATAGGGATGCTTTGAGGGCTGGTGAGGGGATTTGCCCTGGTTGTAAAGAGCCTTACAAGGAACCTGAGATGCAAGTTGAGGCTAGCTTACAGGTACTGCCACTGCCTCCTGGTGCTGGGGCTAATAAGAGGGAGAAGAGGTTGTCGTTGGTGAAATCGAGGGCGTTGACGAGGAGCCAGAGTAATGAGTTTGATCATGCTAAGTGGTTGTTTGAAACCAAGGGGAGCTATGGATATGGGAATGCTATGTGGCCTAAAGAGTCTGAACCTGATGCCAGTTCTGTTTCAGGTTCTGAATGGATGGGGGGTGACCCTAATGTATTCAAGGAAAAGCAGTGGAAGCCCTTGACCCGGAAATTGAGTATTTCTGCTGCAATTCTCAGTCCTTATCGGCTCATGATATTAGTTCGGCTAGTGGTTCTAGTTTTCTTCCTGAAGTGGAGGGTCGAAAACCCCAATGAAGATGCAGTGTGGCTATGGGGCATGTCTGTGGTTTGTGAAATCTGGTTTGCATTCTCCTGGGTGCTAGACCAGCTTCCTAAGCTCTTCCCCGTAAACCGTGTTACTGATCTTGATGTTTTGAAAGAGAAGTTTGAAACTCCTAATCCCACCAATCCTACTGGGAAGTCTGATCTTCCAGGAATAGATATGTTTGTCTCAACCGCTGATCCAGAAAAAGAACCACCACTTGTTACTGCAAATACCATCCTTTCTATTCTAGCCGCTGATTATCCTGTTGAGAAACTTTCATGTTATGTCTCTGACGATGGAGGTGCACTTCTAACTTTTGAGGCCATGGCAGAGGCTGCAGGTTTTGCCAATATGTGGGTTCCTTTTTGCCGGAAGCATGACATTGAACCCAGGAACCCGGAATCTTATTTTAGCCTCAAGAGAGATCCCTACAAGAACAAAGTGCGGTCTGACTTTGTGAGGGACCGCAGGCGAGTGAAGCGTGAGTATGACGAGTTCAAGGTTCGGATCAATAGCCTTCCTGATTCGATCCGGCGCCGTTCTGATGCTTATAATGCCAGAGAAGAAATGAATGCAATGAAGAAGTGGAGAGAGAATGGAAATGAAGAACCAATGGAGAATTTGAAGAATCCTAAAGCTACATGGATGGCTGATGGTACTCACTGGCCTGGTACTTGGACAACTTCTGCACCAGAGCATTCCAGGGGTGATCATGCCAGTATCATACAGGTAATGTTAAAACCCCCAAGTGATGAACCACTGAAAGGCACAGCATCAGATTCAAATGCCTTGGATTTCAGTGAAGTTGATATACGTCTTCCTATGCTTGTCTATGTTTCTCGTGAAAAACGACCCGGCTATGATCACAACAAAAAGGCCGGGGCAATGAATGCCCTTGTTCGAGCCTCAGCCATAATGTCCAATGGCCCTTTCATACTTAATCTTGACTGTGACCACTACATATATAACTCTCAGGCACTGAGAGAAGGAATGTGCTTCATGATGGACCGCGGTGGGGACAGGCTCTGCTATGTTCAATTTCCTCAAAGGTTTGAAGGAATCGACCCCAATGATCGCTATGCCAATCACAACACTGTCTTCTTTGATGTCAATATGCGCGCTCTTGATGGAATTCAAGGTCCTGTATATGTTGGCACAGGATGTCTATTTCGAAGAACTGCTCTCTATGGCTTTGATCCACCCCGGATCAAAGAAGAGGCCGGTTGGTTTGGTCGGAAGAACAAGAAATCCTCAACAGTAGCATCTGTCCCCGAAGCCGGTGCTGAGGAACAATCATTGAGGAATGGTGGTGTTGAGGATGAAGAAATGACCACTGCTCTTGTTCCAAAGAAATTTGGCAACTCAAGTCTTCTTGTTGATTCAATCAGGGTGGCTGAGTTCCAAGGGCTGCCCCTTGCTGATCATTCATCTATCAAATATGGCCGTCCACCCGGTGCTCTAACTCTCCCTCGCGATCCTCTTGACGCTGCTACCGTTGCTGAGGCCATCAATGTCATCTCATGTTGGTATGAAGACAAAACTGAATGGGGCCTTAGAGTTGGGTGGATTTATGGTTCTGTTACTGAGGATGTTGTGACAGGCTACAGAATGCACAATAGAGGATGGAAGTCTATATACTGTGTGACCAAAAGGGATGCCTTTCGCGGCACTGCTCCGATCAATCTGACAGATAGGCTTCACCAGGTTCTTCGGTGGGCAACCGGCTCAGTTGAGATCTTCTTTTCGCGCAACAATGCTCTCTTGGCCAGCTCTAGATTGAAATTTCTGCAGAGGATTGCTTACCTCAATGTTGGAATTTATCCATTCACTTCCATCTTCCTTATTGTGTATTGCTTTGTGCCTGCTCTTTCACTTTTCACTGGCCAGTTCATTGTGCAAACCCTTGAAGTCACCTTCCTGGTTTACCTCTTGGGCATAACCTTGACCCTTGTCATCCTTGCTGCATTGGAAATCAAGTGGTCTGGCATTGAGCTTGAAGAATGGTGGAGGAATGAGCAATTCTGGTTGATTGGAGGCACAAGTGCACACCTTGCTGCTGTGCTCCAGGGTCTGCTAAAGGTGATGGCTGGCATTGAGATTTCATTCACTTTGACATCAAAATCGGGCGGTGACGACGAAAACGATGAATATGCTGATCTCTATGTGATCAAGTGGACATCTCTTATGATACCACCAATCACAATCATGATGGTTAATCTGATAGCCATTGCTGTTGCTGTTAGCAGAACTATATACAGTGAGAATCCTGAATGGAGCAGTTTGCTTGGAGGTGTGTTTTTCAGCTTTTGGGTCTTGTCTCATTTGTATCCCTTTGCAAAAGGGCTAATGGGTAGAAGGGGTAGGACACCCACTATTGTGTTTGTATGGTCAGGTCTAATTTCAATTACTATCTCACTCCTTTGGGTTGCTATTGACCCACCCTCTGGCAGCAGCAGCCAAATTGGAGGCTCATTCCAATTCCCTTGA 3369 0.4681 MASKFKHGSSMVRKITQLSNDMDQEEGENGSVGLATYMVHIPPTPDNQPIEIALERSNSRRVEDQYASSSMFTGGFNQLTRAHLKDKVIESESSHPQMAGAKGSSCQVPGCDGRVMTDERGLDVLPCECDYKICRDCYRDALRAGEGICPGCKEPYKEPEMQVEASLQVLPLPPGAGANKREKRLSLVKSRALTRSQSNEFDHAKWLFETKGSYGYGNAMWPKESEPDASSVSGSEWMGGDPNVFKEKQWKPLTRKLSISAAILSPYRLMILVRLVVLVFFLKWRVENPNEDAVWLWGMSVVCEIWFAFSWVLDQLPKLFPVNRVTDLDVLKEKFETPNPTNPTGKSDLPGIDMFVSTADPEKEPPLVTANTILSILAADYPVEKLSCYVSDDGGALLTFEAMAEAAGFANMWVPFCRKHDIEPRNPESYFSLKRDPYKNKVRSDFVRDRRRVKREYDEFKVRINSLPDSIRRRSDAYNAREEMNAMKKWRENGNEEPMENLKNPKATWMADGTHWPGTWTTSAPEHSRGDHASIIQVMLKPPSDEPLKGTASDSNALDFSEVDIRLPMLVYVSREKRPGYDHNKKAGAMNALVRASAIMSNGPFILNLDCDHYIYNSQALREGMCFMMDRGGDRLCYVQFPQRFEGIDPNDRYANHNTVFFDVNMRALDGIQGPVYVGTGCLFRRTALYGFDPPRIKEEAGWFGRKNKKSSTVASVPEAGAEEQSLRNGGVEDEEMTTALVPKKFGNSSLLVDSIRVAEFQGLPLADHSSIKYGRPPGALTLPRDPLDAATVAEAINVISCWYEDKTEWGLRVGWIYGSVTEDVVTGYRMHNRGWKSIYCVTKRDAFRGTAPINLTDRLHQVLRWATGSVEIFFSRNNALLASSRLKFLQRIAYLNVGIYPFTSIFLIVYCFVPALSLFTGQFIVQTLEVTFLVYLLGITLTLVILAALEIKWSGIELEEWWRNEQFWLIGGTSAHLAAVLQGLLKVMAGIEISFTLTSKSGGDDENDEYADLYVIKWTSLMIPPITIMMVNLIAIAVAVSRTIYSENPEWSSLLGGVFFSFWVLSHLYPFAKGLMGRRGRTPTIVFVWSGLISITISLLWVAIDPPSGSSSQIGGSFQFP 1122
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo8g01421 1122 FunFam cellulose synthase-like protein D3 557 694 - -
Pumo8g01421 1122 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 89 169 IPR013083 -
Pumo8g01421 1122 Pfam RING/Ubox like zinc-binding domain 108 157 - -
Pumo8g01421 1122 SUPERFAMILY RING/U-box 95 163 - -
Pumo8g01421 1122 MobiDBLite consensus disorder prediction 714 734 - -
Pumo8g01421 1122 Pfam Cellulose synthase 352 1110 IPR005150 GO:0016020|GO:0016760|GO:0030244
Pumo8g01421 1122 PANTHER X-BOX TRANSCRIPTION FACTOR-RELATED 250 1091 - -
Pumo8g01421 1122 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 553 708 IPR029044 -
Pumo8g01421 1122 FunFam Cellulose synthase-like protein D3 89 169 - -
Pumo8g01421 1122 SUPERFAMILY Nucleotide-diphospho-sugar transferases 367 721 IPR029044 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo8g01421 Pumo-Chr8 46901236 46906517 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo8g01421 23 1122 Glycosyltransferase AT3G03050 76.259 0.0 1758
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo8g01421 K20924 - gmx:100813900 2048.86
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo8g01421 8 46901236 46906517 Pumo8g01421 8 46901236 46906517 ECH