Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo8g01404 ATGGAAGCAAAAACCACAAAGGCATATAGGGCTGCACTCAATTTTAAGAGAAAGCGAGCTACCCAATTTACTGCACGTATAAATGGAGCTTCGCGACCAAGAAGCAGGATTGTAAAACGAATAAAATTGGGTGATTATAGAAACAAGCTCAGGGTTATAAAACGGATAAGACTGGGTGGATATAAAAACAAGCTGGAAAATGCTGGTCCTCATATTGGACAGTCCTCGAGTAGACGCTTTGTAAGTTATAAAAAGAGTGGGAGACCGGAACGATTAATGTTCTATAGGAATGGTGAATGGGAGGACTTTCCTAACAATGTTCTTGACTTAGTTAGGAAAGATCTTGAAATCAAGAAGGCGGTTGTGGAGGTGGAATTAAATGGGTTTCATATGGTGTTAGATTTTTTACATATGTATAAGTTGGACACGAAAACTGGTTTGCAACAACCAATGGCTTGGATTGATGAGGCAGGAGGCTGCTTTTTCCCTGAGGTCTATGCTGTTTATGATGAAGAGCCTTACAATCTCTGCAAACAGGATGCTGGAAAGCGTACGGAATCATATGATTCCAATGAAATAAAATTACATTTAGAAATTGAATTAGATGGACTGGATCAATCCAACTTGAGGGATTGTAGTGGGGAGTCCAATGCTTTAGTTAAGGGTAAAAAAATTGATACTAAACAAAACTGCTGTCCATATGATGTAGAAGATGAAAATAGCATTAACCAAAAGGACTGTAGAAATGTTGATGAATCTATATATGGAAAGTTGGATTCAGATTCTGTACTGAAGATGTTTCTTAGGGCAATGAATATTAATGGCTTTACCGATTCTGACATTGTTGGGATTTACCGCTGCTCAAGTGCGTCAATGCAAGCACGTTTGGAGCTATTCCAGAAGCAAGCTGAAATTACCAAAAAATGTCGCGGGGATGCTAATGTTCAATATGCCTGGCTTGCTTCTTCTAAAGGAGAACTGTCTACAATGATGGAGTATGGACTTGGTCATTGTGAACTATCTACATCAAAATGCATATATGGCATTGGTTTTCACCTTGCAGCTGTTAACTGGCCTAGCGCCAGTACTTGTTATTGTGATGTTGACGAAAATGGGGTTCGACACTTGGTCCTTTGCCGTGTAATAATGGGTAACATGGAGATTCTCCATCCAGGCACTGGTCAGTTCCAACCCAGTAGCTGTGAATATGATAATGGGGTGGATGACATTCATTGTCCGAGATTCTACGTGGTTTGGAATATTAACATGAACACCCACATCTATCCAGAATTTGTTGTTAGCTTCAAGGTCTCTTCTGATGTTGAAGGCCTTTTATGTGGAAGTGAAAGGAGGAATAATGTTTCTGGGATTAATACAGCCTGTCATGGTCCTCAAGGCCTGTTAAATTCAGACTCTTGTACAGTAATTAAAGGATCAGCTGCCCCAAAACGTCCAACATTCAATTGTCTGCCTTTTCCTTGGCTTTTTGCTGTTCTCAGAAACAAGGTTTCTCCGAAGGATATGGATCTTATCAGAAGACATTATGAACAGTACTTGTCAAAGCAGATGTCCCGAGATGATTTTATGAAGATGCTGCGGCTAACAGTTGGAGATGATCTATTGAAACTCGCAATAACACAAATTAAATTGAAGATGCTATCCAAAGTTGAACAGAAAGAATCAAATAAGAAGGAAGGCTGA 1701 0.3962 MEAKTTKAYRAALNFKRKRATQFTARINGASRPRSRIVKRIKLGDYRNKLRVIKRIRLGGYKNKLENAGPHIGQSSSRRFVSYKKSGRPERLMFYRNGEWEDFPNNVLDLVRKDLEIKKAVVEVELNGFHMVLDFLHMYKLDTKTGLQQPMAWIDEAGGCFFPEVYAVYDEEPYNLCKQDAGKRTESYDSNEIKLHLEIELDGLDQSNLRDCSGESNALVKGKKIDTKQNCCPYDVEDENSINQKDCRNVDESIYGKLDSDSVLKMFLRAMNINGFTDSDIVGIYRCSSASMQARLELFQKQAEITKKCRGDANVQYAWLASSKGELSTMMEYGLGHCELSTSKCIYGIGFHLAAVNWPSASTCYCDVDENGVRHLVLCRVIMGNMEILHPGTGQFQPSSCEYDNGVDDIHCPRFYVVWNINMNTHIYPEFVVSFKVSSDVEGLLCGSERRNNVSGINTACHGPQGLLNSDSCTVIKGSAAPKRPTFNCLPFPWLFAVLRNKVSPKDMDLIRRHYEQYLSKQMSRDDFMKMLRLTVGDDLLKLAITQIKLKMLSKVEQKESNKKEG 566
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo8g01404 566 ProSiteProfiles PARP catalytic domain profile. 235 456 IPR012317 GO:0003950
Pumo8g01404 566 ProSiteProfiles RST domain profile. 483 554 IPR022003 -
Pumo8g01404 566 SUPERFAMILY ADP-ribosylation 278 436 - -
Pumo8g01404 566 PANTHER INACTIVE POLY [ADP-RIBOSE] POLYMERASE SRO4-RELATED 70 549 IPR044964 -
Pumo8g01404 566 Gene3D - 257 437 - -
Pumo8g01404 566 Pfam RCD1-SRO-TAF4 (RST) plant domain 484 548 IPR022003 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo8g01404 Pumo-Chr8 46675630 46679053 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo8g01404 - - gmx:100800707 748.043
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo8g01404 8 46675630 46679053 Pumo8g01404 8 46675630 46679053 ECH