Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo8g01376 ATGGCAATGAGCAACAATGTGATCGGATGCATAAACTTCGTGGCCGTGATCCTCTCAATCCCGATCATCGGCGCCGGAATCTGGCTGACAAACGAGCAAGCCGACTCCTGCGTCCAGTTTCTGCAATGGCCAGTCATCATCCTCGGAGTTCTCATCCTGGTCGTGGCTCTCGCCGGTTTCATCGGAGCCTTCTTCAGAGTGTCGTGGCTCCTCATTGTCTACCTGGTCGCCATGCTCGTCCTCGTGATACTGCTCGTGTGTCTGGTGTGTTTTGTTTACATGGTCACTCTTCGCGGCCACGGCAACATTGAACCCAACCGCGCTTACTTGGAGTATCGCATGGATGACTTCTCCGGCTACCTTCGCCGTAGGGTTAGAAGCTCCTTCAAGTGGGACCGCATCAGAAGCTGCCTTAGCCAGACCAACATGTGCGCTGAGCTCAACCAGAGTTACCGAATGGCTCAGGACTTCTTCAACGCACGTCTAACGCCCATGCAGTCAGGGTGCTGCAAGCCACCAACGCAATGTGCGTACACGTTTGTGAATCCAACCTATTGGATTAGCCCCATCAACACAGCAGCAGATATGGATTGCCTGCAATGGAGCAACGACCAAACACAACTTTGCTACAATTGTGACTCCTGCAAGGCCGGTTTGTTGGCAAATCTTAGGAAGGAGTGGAGAAGGGCCAATGTGATATTAATCATCACAGGTCATTGTTTTAATAATTGTGTATTTGATAGGGTGCTGTGCCTTTAG 759 0.5138 MAMSNNVIGCINFVAVILSIPIIGAGIWLTNEQADSCVQFLQWPVIILGVLILVVALAGFIGAFFRVSWLLIVYLVAMLVLVILLVCLVCFVYMVTLRGHGNIEPNRAYLEYRMDDFSGYLRRRVRSSFKWDRIRSCLSQTNMCAELNQSYRMAQDFFNARLTPMQSGCCKPPTQCAYTFVNPTYWISPINTAADMDCLQWSNDQTQLCYNCDSCKAGLLANLRKEWRRANVILIITGHCFNNCVFDRVLCL 252
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo8g01376 252 PRINTS Transmembrane four family signature 6 29 - -
Pumo8g01376 252 PRINTS Transmembrane four family signature 38 64 - -
Pumo8g01376 252 PRINTS Transmembrane four family signature 65 93 - -
Pumo8g01376 252 PANTHER TETRASPANIN-8-RELATED 1 237 IPR044991 GO:0009734|GO:0016020
Pumo8g01376 252 Pfam Tetraspanin family 6 237 IPR018499 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo8g01376 Pumo-Chr8 46320474 46322860 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo8g01376 1 231 Miscellaneous Gene Families AT5G46700 70.130 1.60e-118 338
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo8g01376 - - gmx:100795775 442.58
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo8g01376 8 46320474 46322860 Pumo8g01376 8 46320474 46322860 ECH