Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo8g01235 ATGGCAACCGAAGAAGCACCCATCCATGGGGATATCTTAGAGGCCATATTCTCGCACGTGCCACTCATCCACCTAGTGCCGGTCTCTCACGTGTCAAATTCCTGGAAGCGTGCGGTGTCCTCCTCCCTCGCCCACGTCAGACCCATCAAGCCGTGGCTCATAGTCCTCACTCAGAGCCTCCGCGACTCGCACGTGACAACCATGCACGCCTACGACCCTCGCTCGCACGTGTGGCTCGAAATCAAACCCCACACGTGGCGTCTCGCCTCCCCCGTGCGGTCCTCTCACTCAGCACTGTTCTACACGCTCACCCCGGCGGAGTTCGCCTTCTCCGTCGACGCGCTGCACCTCACCTGGCACCACGCGCCCTCCCCGCGAGTGTGGCGCACCGATCCCGTGGTGGCGCGCGTGGGGCGGCGCGTGGTGATGGCCGGCGGCGCGTGCGAGTTCGAGGACGACCCGCTCGCGGTGGAGATGTACGACACGGAGAGCCGCGCCTGGGAGGCGTGTCCCTCCATGCCGGCGCTGCTGAAGGGCTCGACGGCGTCGTCGTGGCTGTCGGTGGCGGTCGCCGGAGAAACCATGCACATGACGGAGAAACACTCCGGCGTGACGTACTCGTTCGACACCGTTTCGAAAACGTGGAAGGGACCGTTTAATTTGAGACCCGACGAGAGTGTTTTTCACTGCGTCACCGGAACCCTAGGGGGGAGGGTCATGGTGGCGGGGGTGGTGGGGGAAGTGGGGAACGTGAAAGGCGTGAAGCTGTGGGAGGTTCGGGTTCTTCGGGTTCGGGGGGAATTATTAGGTTCGGGGATGGAGGAAGTGGGGGAGATGCCGCAGGAGATGGTTCGGAAGGTGATGGGTGGTTGGGACTTAGGTTCGGTGGTGGTGACGTGGATTGGGGATTTTGTTTACGTGAGGAACACTTCCGAACCGGAGGAGCTGGTGGTGTGTGAAGTATTGCATGGGGTTGGGTGCGAGTGGCGGAGTGTACGGAACTCCGCCGCTAGATACGGCGCGAGGATGGTGGTTTGCGGCGGCGATGTGTGCATGGAGGATCTGCAACGGGCGGTGATGTCGGAGAATCCGACATTTTCCATGAAACAAGTGTGA 1116 0.6192 MATEEAPIHGDILEAIFSHVPLIHLVPVSHVSNSWKRAVSSSLAHVRPIKPWLIVLTQSLRDSHVTTMHAYDPRSHVWLEIKPHTWRLASPVRSSHSALFYTLTPAEFAFSVDALHLTWHHAPSPRVWRTDPVVARVGRRVVMAGGACEFEDDPLAVEMYDTESRAWEACPSMPALLKGSTASSWLSVAVAGETMHMTEKHSGVTYSFDTVSKTWKGPFNLRPDESVFHCVTGTLGGRVMVAGVVGEVGNVKGVKLWEVRVLRVRGELLGSGMEEVGEMPQEMVRKVMGGWDLGSVVVTWIGDFVYVRNTSEPEELVVCEVLHGVGCEWRSVRNSAARYGARMVVCGGDVCMEDLQRAVMSENPTFSMKQV 371
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo8g01235 371 SUPERFAMILY Kelch motif 51 259 IPR015915 GO:0005515
Pumo8g01235 371 PANTHER F-BOX/KELCH-REPEAT PROTEIN SKIP4 9 306 - -
Pumo8g01235 371 Pfam F-box domain 11 43 IPR001810 GO:0005515
Pumo8g01235 371 Gene3D - 50 283 IPR015915 GO:0005515
Pumo8g01235 371 SUPERFAMILY F-box domain 11 43 IPR036047 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo8g01235 Pumo-Chr8 44025341 44027853 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo8g01235 - - gmx:100819427 610.142
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo8g01235 8 44025341 44027853 Pumo8g01235 8 44025341 44027853 ECH