Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo8g01233 ATGGAAGAGTTGGAGCAGTGGAAGGAACAGCTTTCTCACTTCTGTAATCTAGCTTTGGATCGTCTTCGCGAGGTTCCCCCGAATCAGCTCTACGCTGCTGCAGCCGTCGCGATTTTCACGACTCTGCTTCTTCTCTCAATTCGGTTGTTCAAGCGCGCGAAGTCAAACACCGTTGTGTTGACCGGGCTCAGTGGGAGTGGAAAAACTGTTCTCTTCTATCAACTTAGGGATGGCTCTACTCATCAGGGTACTGTTACATCAATGGAGCCTAATGAAGGCACTTTTATTCTTCACAATGAGAAAACGAGGAAGGGAAAGATAAAACCTGTTCATGTTGTTGATGTTCCTGGGCATTCTCGGCTTCGACCCAAACTGGATGAGTACTTGCCTCAAGCAGCTGGGATTGTTTTTGTGGTTGATGCTTTGGACTTTTTACCAAACTGTCGAGCTGCTTCAGAGTACCTATATGATCTATTGACTAAAGGAAGTGTTGTGAGGAAGAAGATTCCAGTGCTTATTCTCTGCAACAAAACAGACAAAGTCACTGCTCATACAAAAGAGTTTATCCGAAAACAGATGGAGAAGGAAATAGACAAATTACGGGCATCAAGAAGTGCAATATCAGCAGCTGACATTGCAAACGAGTTCACCCTGGGGGTACCCGGTGAGCCATTTTCTTTTACCCAGTGCTCTAACAAAGTAACAACTGCAGATGCTTCTGGTTTAACTGGGGAAATATCTCAGCTGGAAGAGTTTATCAGAGAACATGTAAAGCAATAG 780 0.4462 MEELEQWKEQLSHFCNLALDRLREVPPNQLYAAAAVAIFTTLLLLSIRLFKRAKSNTVVLTGLSGSGKTVLFYQLRDGSTHQGTVTSMEPNEGTFILHNEKTRKGKIKPVHVVDVPGHSRLRPKLDEYLPQAAGIVFVVDALDFLPNCRAASEYLYDLLTKGSVVRKKIPVLILCNKTDKVTAHTKEFIRKQMEKEIDKLRASRSAISAADIANEFTLGVPGEPFSFTQCSNKVTTADASGLTGEISQLEEFIREHVKQ 259
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo8g01233 259 Gene3D - 50 257 IPR027417 -
Pumo8g01233 259 ProSiteProfiles small GTPase Arf family profile. 49 253 - -
Pumo8g01233 259 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 58 205 IPR027417 -
Pumo8g01233 259 Coils Coil 190 210 - -
Pumo8g01233 259 CDD SR_beta 56 255 IPR019009 -
Pumo8g01233 259 PANTHER TRANSFERRIN 30 256 - -
Pumo8g01233 259 Pfam Signal recognition particle receptor beta subunit 54 234 IPR019009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo8g01233 Pumo-Chr8 43972910 43975551 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo8g01233 1 258 Miscellaneous Gene Families AT5G05670 73.745 4.48e-140 392
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo8g01233 K12272 - gmx:100800572 494.582
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo8g01233 8 43972910 43975551 Pumo8g01233 8 43972910 43975551 ECH