Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo8g01220 ATGCGGTTAATGGAGGACTTTCTTGATCTTGCTAAAGAAAATACAGAAAAGGATTTGGAAACTTGTGGTATACTTGGTGCCTATCTTGAGAAGGGAACCCTCTATATGACTACTCTGATCGTACCAAAGCAGGAATCAGCTTCCAATTCTTGTCAAGCTACAAATGAGGAGGAAGTTTTCAAAATTCTTAATGAAAGATCCCTTTATCCTGTGGGATGGATCCATACCCATCCTTCTCAAAGTTGTTTCATGTCATCTGTGGATCTGCACACTCAATATTCATACCAGGTGATGATTCCTGAGGCATTTGCCATTGTCTTGGCACCAAATGATACCTCAAGGAGCTATGGACTATTTCGCCTAACCGACCCTGAAGGAATGAATATTCTGAAAAATTGCCAGGAGACAGGATTTCATCCGCATAAAGAACCAGATAATGGCAACCCCGTGTATGAGAACTGCTCCAATGTATACAAAAACTCCCATCTAAGGTTTGAAATCTTTGATTTACGCTAA 516 0.405 MRLMEDFLDLAKENTEKDLETCGILGAYLEKGTLYMTTLIVPKQESASNSCQATNEEEVFKILNERSLYPVGWIHTHPSQSCFMSSVDLHTQYSYQVMIPEAFAIVLAPNDTSRSYGLFRLTDPEGMNILKNCQETGFHPHKEPDNGNPVYENCSNVYKNSHLRFEIFDLR 171
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo8g01220 171 SMART pad1_6 3 124 IPR000555 GO:0005515|GO:0008233|GO:0008237
Pumo8g01220 171 Pfam JAB1/Mov34/MPN/PAD-1 ubiquitin protease 4 101 IPR000555 GO:0005515|GO:0008233|GO:0008237
Pumo8g01220 171 CDD MPN_AMSH_like 2 171 IPR044098 GO:0016579|GO:0061578|GO:0070536|GO:0140492
Pumo8g01220 171 ProSiteProfiles MPN domain profile. 1 125 IPR037518 -
Pumo8g01220 171 PANTHER AMSH-LIKE PROTEASE 2 171 - -
Pumo8g01220 171 Gene3D Cytidine Deaminase, domain 2 1 171 - -
Pumo8g01220 171 FunFam AMSH-like ubiquitin thioesterase 2 1 171 - -
Pumo8g01220 171 SUPERFAMILY JAB1/MPN domain 3 127 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo8g01220 Pumo-Chr8 43811765 43814393 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo8g01220 K11866 - gmx:100807282 343.199
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo8g01220 8 43811765 43814393 Pumo8g01220 8 43811765 43814393 ECH