Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo8g01217 ATGGCAGATTCAAAACCAGGATTGAGGAAACCAGTGTTCACCAAGGTTGACCAGCTTCGCCCGGGGACCAGTGGGCATACTTTAACTGTGAAGGTGGTCAATGCTAAGATGGTGATGCAGAGAGGTCGTTCTGATGGTCCTCAATCCCGTCAAATGCGAATTGCTGAGTGCTTGGTTGGTGATGAGACTGGAATGATCATATTCACTGCCAGAAATGATCAAGTGGATACGATGACAGAGGGTGCTACTGTGACCCTGCGTAATGCCAAAATTGACATGTTCAAAGGATCAATGAGGCTTGCTGTGGACAAGTGGGGCCGTGTGGAACTCGCAGAACCTGCTAGTTTCACTGTGAAGGAAGATAATAACTTGTCTCTCATTGAGTATGAACTGGTGAATGTTGTTGTGGAATGA 414 0.4686 MADSKPGLRKPVFTKVDQLRPGTSGHTLTVKVVNAKMVMQRGRSDGPQSRQMRIAECLVGDETGMIIFTARNDQVDTMTEGATVTLRNAKIDMFKGSMRLAVDKWGRVELAEPASFTVKEDNNLSLIEYELVNVVVE 137
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo8g01217 137 CDD SoSSB_OBF 27 110 - -
Pumo8g01217 137 PANTHER OS05G0244600 PROTEIN 3 134 - -
Pumo8g01217 137 SUPERFAMILY Nucleic acid-binding proteins 7 135 IPR012340 -
Pumo8g01217 137 Gene3D - 23 126 IPR012340 -
Pumo8g01217 137 FunFam Uncharacterized protein At4g28440 23 126 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo8g01217 Pumo-Chr8 43787710 43790838 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo8g01217 - - gmx:100499859 260.381
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo8g01217 8 43787710 43790838 Pumo8g01217 8 43787710 43790838 ECH