Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo8g01211 ATGGCGGATTCCGCCTCTTCCCCCGCAACCCTACCGCCCAATCCCCAACCCTCCGAATCCGCACCCCCCAACCAACCCGATCCACTCCCCCAATCCTCAACGCCACCCTCATCCACGCCCCTCGCCGCAAACCCTAATCCCAATCCAACGCTGCTCCCTCTGCCGCCCGCGCTACTCTTTCCGGTGGGCACTCCGCCGCAGGTCCCCGGCGTCCTCCCTCCCTCATTCCGGCCGCTCGCGCCTCAATTCTCCCCCGTCCCCGCTCCGAACCCGGCCTATCCAAACCCTGCCGTTCCTCCTCCCGGCGTGGCCGGCGCCGCCGCGATGCAACCCATGATGTCGTACCAGGTTCAACCCGGTAACCCGACCATGCGACCATTCGCTCCGATCCCTAACGGTTACGCCGCAGCTCCGACCGTAAATCCCGCGGGAATTCCTCGTTACCCCCCTCCTTATGGAACTATGGTTCGTCCTGTATTTCCTCCACGCCCTCCTGGAGCAGTTAACATACCTACAGTATCACGCCCACCTGTTGCAGGGATCCCTGCAGTTCGCCCAATTATTCCTCCTGTTGTCAGACCTGTGGTAGCCCCTAGTGTTACTCCAGCTGAGAAGCCTCAAAACACAGTTTACATTGGCAAGATTGCACCAACTGTGGAAAATGAGTTCATGCTCTCTCTCCTTCAATTATGTGGAACTATCAAGACCTGGAAACGTCCTCAGGATTTATCAACTGGAACTCCTACAAGTTTTGGGTTTTATGAGTTTGAGTCTGCAGAAGGGGTTCTCCGTGTCTTGCGTCTCCTTACTAAACTGAATATTGATGGGCAAGAACTGAAGATCAACGTGAATCAAGCTATGAAAGAAAATCTGGAGCGGTATGTTAAGACAAAAACTGAGAACTTGAAGAACAAAGAAACTCAGGCAGTAGTTGAAAAAGACGAAGGTGAACAACCTTCTAATGCAAACGAGGATGCAAAGGCTGACACAGAACCCTCAAATAAAGAGGCTAGTGAATCATCAAACAAGGAATCCCATGATGTGGCAAACTTTGGGATTGTCACTGATGAAGATAGAGAAGCTGATCATGAGGCTTTAGAAAAGATTACAAAGATGATAGAGGAAAGGTTGAAGACTAGACCTTTGCCTCCACCACCTGCACAGCCAACTGGTGATGGTTCTGTAAATTCAACTCCAGAACAACCTGTTAAAACAAGAGATGGAGACTCTGTTGTGGATACAGAGAAGAATGAATCTGCTGAAAATAAAAATGAGAAAGAGACAAACAATGATAACAAACCAACCAGTGAACATGAAAGGACCGAAAGCCCTGACAGAAGGCATGATAGAAAAAGCAGAGAGAGGGACCGAGATAGGGAGCTAAAACGAGAAAAGGAAAGAGAACTTGAAAGATATGAAAGAGAAGCAGAGCGGGAACGTGTTCGGAAAGAGAGGGAACAAAGACGAAGGGTTGAGGAGGCTGAGCGTCAGTATGAAACATATTTGAAGGATTGGGATTATAGAGAACGAGAGAAAGAGAAAGAGCGCCAGTATGAAAAAGAGAAGGAGAAGGAAAGGGAACGTAAAAGGAGAAAGGAGATACTCTATGATGAAGAGGATGAGGATGAGGATTCTAGGAAGAGGTGGCGCAGAAGTGTGATAGAGGAGAAGAGAAAGAAGAGACTGCGTGAGAAGGAAGATGACCTGGTTGACCGACAAAAAGAAGAGGAAGAAATTGCTGAGGCCAAAAAGAAGGCTGAGGAGGAACAGAAGCGACAAAGAGATGCATTAAAGCTATTATCTGAGCATGTGGTAAATGGTGGTAATGAAAATATGATTACTGAAGAGATTACTAATGAAGTTAAAAGCATTGTTGCTGAACAAGATATTGTAGCTGATTATAGTCAGTGA 1911 0.4814 MADSASSPATLPPNPQPSESAPPNQPDPLPQSSTPPSSTPLAANPNPNPTLLPLPPALLFPVGTPPQVPGVLPPSFRPLAPQFSPVPAPNPAYPNPAVPPPGVAGAAAMQPMMSYQVQPGNPTMRPFAPIPNGYAAAPTVNPAGIPRYPPPYGTMVRPVFPPRPPGAVNIPTVSRPPVAGIPAVRPIIPPVVRPVVAPSVTPAEKPQNTVYIGKIAPTVENEFMLSLLQLCGTIKTWKRPQDLSTGTPTSFGFYEFESAEGVLRVLRLLTKLNIDGQELKINVNQAMKENLERYVKTKTENLKNKETQAVVEKDEGEQPSNANEDAKADTEPSNKEASESSNKESHDVANFGIVTDEDREADHEALEKITKMIEERLKTRPLPPPPAQPTGDGSVNSTPEQPVKTRDGDSVVDTEKNESAENKNEKETNNDNKPTSEHERTESPDRRHDRKSRERDRDRELKREKERELERYEREAERERVRKEREQRRRVEEAERQYETYLKDWDYREREKEKERQYEKEKEKERERKRRKEILYDEEDEDEDSRKRWRRSVIEEKRKKRLREKEDDLVDRQKEEEEIAEAKKKAEEEQKRQRDALKLLSEHVVNGGNENMITEEITNEVKSIVAEQDIVADYSQ 636
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo8g01211 636 MobiDBLite consensus disorder prediction 1 52 - -
Pumo8g01211 636 MobiDBLite consensus disorder prediction 562 594 - -
Pumo8g01211 636 Coils Coil 559 603 - -
Pumo8g01211 636 MobiDBLite consensus disorder prediction 510 547 - -
Pumo8g01211 636 PANTHER SPLICING FACTOR PWI DOMAIN-CONTAINING PROTEIN / RNA RECOGNITION MOTIF (RRM)-CONTAINING PROTEIN 1 633 - -
Pumo8g01211 636 CDD RRM_RBM25 208 291 IPR034268 -
Pumo8g01211 636 Coils Coil 507 535 - -
Pumo8g01211 636 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 210 280 IPR000504 GO:0003723
Pumo8g01211 636 Gene3D - 200 318 IPR012677 -
Pumo8g01211 636 SMART rrm1_1 209 282 IPR000504 GO:0003723
Pumo8g01211 636 Coils Coil 288 308 - -
Pumo8g01211 636 MobiDBLite consensus disorder prediction 406 494 - -
Pumo8g01211 636 MobiDBLite consensus disorder prediction 374 494 - -
Pumo8g01211 636 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 208 286 IPR000504 GO:0003723
Pumo8g01211 636 SUPERFAMILY RNA-binding domain, RBD 183 286 IPR035979 GO:0003676
Pumo8g01211 636 MobiDBLite consensus disorder prediction 299 343 - -
Pumo8g01211 636 Coils Coil 455 504 - -
Pumo8g01211 636 MobiDBLite consensus disorder prediction 299 360 - -
Pumo8g01211 636 MobiDBLite consensus disorder prediction 10 52 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo8g01211 K12822 - gmx:100809428 753.821
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo8g01211 8 43624780 43628735 Pumo8g01211 8 43624780 43628735 ECH