Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo8g01173 ATGTCCGATTCTTCGAGGGGTCGCGTTACCATTACTCTAGGGCGTAGCGGTCAGGTTGTGAAGAGGGATGTGTCTGCTGTAGATGTTTCTTCTTTCTCTTCTCATCCCTCAGCTGGCACTAAGAGGTCTGTTAGAGATAGAATTGGAAGTAATGCAGATAGTTCTGGGTGGCATGGAAATGGACTTGGCGGCAATAAACGACATCGAGGAGATATAAGCATGCAAAATGGACTGGATGGCAATGATCTTCGATTGAAGCTCATGCAAAAAAGTGCATCTAGGCAGGCTGACAGCGATGGCAGTAAGAGGCATATGGACCTCCGTGAAAAACTTTCAAAAGCAAGTCACCATCTGACTAACAGTTTTAATTCGAAGCAGCGAGTACCAGAATCAAGGGAAACAAGTTTGTTGAGGCAAATTCCTTCAGCTAGAAGTTCTGATGATTTACTGCGTATGGAATCCATGAGAAGCTCATACTCTCCTTGGACATTGGATCATATTAGGAGAAGATCACCAGATGGGTTTCCAAGTACTTCCAGGGGGATTTCCCCCCAAAGGGATGCCCAAGACCTACAGAGAAGGCCTTTAAACAGGACATATGATGGTGTCAGATCAGTTTCATATGTAGGTAGGGATGTTCTTGAAACATCAAGGCCTCCAGTAAGTACACCTCAATCTTTCATGTCACGCTCCACAATGTCCACATTGCCTCAAGTAACTGCCAAGCCTGCAGCATCTCATCCTGGCCAACTTCCTCTATCGGGCAGTGTTGCTCAAAGGGCTTCATATGTGGGTGATGAACAAGTACAACAATCACACCAAACTGTGGATGGCCTGTTACATGCTCTGGGACTTCAAAAATATGCCATTCTCTTTAAGGCTGAGGAAGTGGATATGACTGCATTGAAGCAGATGGGAGAAAATGACCTCAAAGAGCTTGGAATTCCCATGGGTCCAAGGAAAAAAATTCTTCTCGCTCTTTTGCCTCGCACCAAGCGTCAACAATGA 1008 0.4544 MSDSSRGRVTITLGRSGQVVKRDVSAVDVSSFSSHPSAGTKRSVRDRIGSNADSSGWHGNGLGGNKRHRGDISMQNGLDGNDLRLKLMQKSASRQADSDGSKRHMDLREKLSKASHHLTNSFNSKQRVPESRETSLLRQIPSARSSDDLLRMESMRSSYSPWTLDHIRRRSPDGFPSTSRGISPQRDAQDLQRRPLNRTYDGVRSVSYVGRDVLETSRPPVSTPQSFMSRSTMSTLPQVTAKPAASHPGQLPLSGSVAQRASYVGDEQVQQSHQTVDGLLHALGLQKYAILFKAEEVDMTALKQMGENDLKELGIPMGPRKKILLALLPRTKRQQ 335
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo8g01173 335 MobiDBLite consensus disorder prediction 116 141 - -
Pumo8g01173 335 MobiDBLite consensus disorder prediction 218 234 - -
Pumo8g01173 335 PANTHER SCP160 111 331 - -
Pumo8g01173 335 FunFam DDHD domain-containing 2 274 335 - -
Pumo8g01173 335 Pfam SAM domain (Sterile alpha motif) 271 327 IPR001660 GO:0005515
Pumo8g01173 335 MobiDBLite consensus disorder prediction 112 141 - -
Pumo8g01173 335 MobiDBLite consensus disorder prediction 27 78 - -
Pumo8g01173 335 SUPERFAMILY SAM/Pointed domain 272 327 IPR013761 -
Pumo8g01173 335 MobiDBLite consensus disorder prediction 166 194 - -
Pumo8g01173 335 Gene3D - 273 335 IPR013761 -
Pumo8g01173 335 SMART SAM_4 268 333 IPR001660 GO:0005515
Pumo8g01173 335 MobiDBLite consensus disorder prediction 215 234 - -
Pumo8g01173 335 ProSiteProfiles SAM domain profile. 271 334 IPR001660 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo8g01173 Pumo-Chr8 42700594 42711164 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo8g01173 232 327 Glycosyltransferase AT3G07170 43.137 1.32e-17 77.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo8g01173 - - gmx:100797199 591.267
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo8g01173 8 42700594 42711164 Pumo8g01173 8 42700594 42711164 ECH