Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo8g01144 ATGGCCACCAACATTCAACTCCTCATCCTTTCACTCCCACCACGTTACCCTTCTTCTTCTTCTTTCACATTTCTTCCCACAACAACAACCGCTCTTCCATTCTCTCTCCTTTGCCCTCGATCCCTTCCGCTCCACCTCAAATTCCGAGCCTCCTTCTCTTTCAAGTCCCCAACCTCAACCCTCCGCACCTTCTCCGACGCCGAGGAGGACGAAGAAGAAGTAGAAGACGACTACGACGAAGAAGAAGAAGATGACGAAGAAGAAGAAGAAGAAGAAGAAGAAGACGACGACGACGTTGCTGCCGACGAATACGACGACGTTTCGGGCGAGGTTTCCGACGGGGAGGCCGACGTGTTCGCTCGGCACGACGGATTCAAGTGGCAGAGAGTCGAGAAGCTCTGCAACGAAGTTAGGGAGTTCGGCGCGGATCTCATCGACGTCGACGAGCTCGCCTCCGTCTACGATTTCCGCATCGACAAGTTTCAGCGGCAGGCGATACTGGCTTTTCTGAGAGGCTGCTCGGTGGTGGTTTCCGCTCCGACGAGCAGCGGGAAGACGCTGATTGCGGAGGCCGCGGCGGTGGCCACGGTGGCTAGGGGACGCCGGATATTCTACACGACGCCGCTCAAGGCGTTGTCCAATCAGAAGTTTCGCGAATTCCGCGAGACTTTTGGCGACAGTAATGTTGGCCTTCTCACAGGTGATTCTGCCGTGAACAAGGATGCTCAGGTTTTGATTATGACCACAGAGATATTGCGTAACATGTTGTATCAGAGTGTTGGTAATGTTTCTTCTGGAAGTGGACTTGTAAATGTTGATGTGATTGTTTTGGATGAAGTTCATTACCTTAGTGACATATCTCGCGGTACAGTCTGGGAGGAGATTGTTATTTATTGCCCAAAAGAAGTTCAACTTATTTGCCTGTCAGCGACTGTTGCAAATCCAGATGAGTTGGCTGGGTGGATTGGTCAGGTATTCAGATTGTGCTGGTGA 993 0.5166 MATNIQLLILSLPPRYPSSSSFTFLPTTTTALPFSLLCPRSLPLHLKFRASFSFKSPTSTLRTFSDAEEDEEEVEDDYDEEEEDDEEEEEEEEEDDDDVAADEYDDVSGEVSDGEADVFARHDGFKWQRVEKLCNEVREFGADLIDVDELASVYDFRIDKFQRQAILAFLRGCSVVVSAPTSSGKTLIAEAAAVATVARGRRIFYTTPLKALSNQKFREFRETFGDSNVGLLTGDSAVNKDAQVLIMTTEILRNMLYQSVGNVSSGSGLVNVDVIVLDEVHYLSDISRGTVWEEIVIYCPKEVQLICLSATVANPDELAGWIGQVFRLCW 330
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo8g01144 330 Gene3D - 118 328 IPR027417 -
Pumo8g01144 330 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 166 330 IPR014001 -
Pumo8g01144 330 MobiDBLite consensus disorder prediction 61 101 - -
Pumo8g01144 330 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 131 327 IPR027417 -
Pumo8g01144 330 PANTHER ATP-DEPENDENT RNA AND DNA HELICASE 79 324 - -
Pumo8g01144 330 FunFam ATP-dependent RNA helicase 120 328 - -
Pumo8g01144 330 SMART ultradead3 154 330 IPR014001 -
Pumo8g01144 330 MobiDBLite consensus disorder prediction 66 101 - -
Pumo8g01144 330 Pfam DEAD/DEAH box helicase 161 313 IPR011545 GO:0003676|GO:0005524
Pumo8g01144 330 Coils Coil 64 95 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo8g01144 Pumo-Chr8 41623444 41626376 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo8g01144 K26077 - gmx:100780908 463.381
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo8g01144 8 41623444 41626376 Pumo8g01144 8 41623444 41626376 ECH