Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo8g01083 ATGTCTGCGGTTGCATTAAAGCCTCTCTTTCCTCTTTGCCGCAGAGAACCTTCATTTCAGCGCCACAAACCAATCCCTTTCAGACTCTTCTTTCTGACTTGCTCTTCCAACCTCAATGATGGTTCCTCCTTCATCTTCCATCACCAACCTCGCAGGACTCTCTCTCCCGTGCATGCAGCTTCTCTCACAGACACACCTGTCCTCCACTCCCTTCAATGCCCTCACACCATCACCAACACTTTCCAAATCAACCGAACCGAACTGGTGGAGGGAAAGATTTTTGTGAGATTAGATCACGGAAAGGGTTTGAGGGATCGGGAGCTTACGGTGGGTTGCAATCTACCCGGAAAATGGATTCTTCATTGGGGAGTTACCTATGTTGATGATGTTGGAAGGGAATGGGATCAACCTCCTCATGATATGATACCCCCTGGATCTGTTATTATAAAGGACTATGCAATAGAGACCCCTTTAAAGAAGTCATCCTTATCTGCTGAAGGAGATATGCTCCACGAAGTCAGGATTGATCTTAAAGCCAACAATGGAATTTCAGCAATTAATTTTGTTCTCAAGGATGAGGAAACGGGAGCTTGGTATAAAAACAAAAGAAGAGATTTCAAGGTTTCTTTGGTCAACAACCTTAAGGAGGATACTAATATAATTGGACCTAAATGGGGCTTTGATTTATGGCCAGGGAATTTGGGGCAGATATCTAAAATGTTCCTCAAGTCAGAAGCTGACCAAGATGACAGCAGTGAATCCAGAGTTCGAGAACAAGAAAATAATCAACCAGAAGGTTTCTATGAGGAAGTGTCTATCACAAAGGAGGTTTTAGTCAATAACTCTATCAGTGTCTCCACCAAAAAATGCTACGAGTCTGGGGCAGTTAAGGACCTTTTACATTTTGAAACTGATCTACCTGGAGATGTTGTCCTTCACTGGGGAGTTTGTAGGGATGATTCAAAAAGGTGGGAAGTTCCACCTCCTCCTCATCCACCAGGCACAGTGGTATTTAAAGACAGGGCTTTGAGAACTCAATTTTGGCCAAGAGATGATGGAAAAGGATCTTCAGCACTAATCACTTTAGAAGAAGAATTTTCAGGGTTTATGTTTGTTCTTAAGCAAAATGAAAATACTTGGTTCAAGTATTATGGAAATGACTTTTATATCCCCCTCTCAAGTTCTAGTAGCTTTCTTGATATTGGCAACAAAGAGGGTCAGTCAGAAGCTATGCAGAGGGAAGTGATTCAAGAGGCTAGTCAAAAGAGTTCTTTCTTTGCATTTACTGATACAATAGCCAATGAAATAAGAAATTTGGTCACAGATGATTCCTCTGAGAAGATTCAAAAGACAAAATCCAAAAAAGCGCAACAAAGCATTTTTCAAGAAATTGGAAGGCTGGCTGCTGAAGCCTATAATATATTCAGAAGCTCCATTCCAACTTTCTCGGAGGCAACTGCTGCAGAACCTGAGGTAACTATTGTGGAATCTCAGGCAACAACTATTGTGGTACCTGAGGCTTCAGTGGAATCAGAGACACTGTCCCTGGATCCAAAATTATGCTCAGGGACAGGCACAGGGTATGAAATATTATGCCAAGGGTTTAACTGGGAATCTCATAAATCTGGAAGATGGTACATGGAGCTTAAAGAGATGGCTTCAGAACTAGCATCACTTGGTTTCACTGTGGTCTGGTTGCCACCACCTACAGAGTCTGTTTCACCTGAAGGATACATGCCAAAGGATTTATATAATTTAAATTCCAGATACGGAAACATTGATGAACTGAAAGATTTGGTGAAAAGATTTCATGAAGTTGGGATCAAAACTCTAGGAGATGCTGTTTTAAACCACCGCTGTGCTCATTATCAGAATCAAAATGGTATTTGGAACATATTTGGAGGCCCTCTTAACTGGGATGATCGTGCAGTTGTAGCTGATGATCCACATTTTCAGGGCAGGGGCAACAAGAGTAGTGGAGATAATTTTCATGCCGCTCCAAACATTGATCATTCACAGGAGTTTGTGAGAAAGGATCTCACAGAATGGTTATGCTGGTTGAGGAAAGAAATTGGGTATGATGGATGGAGGCTTGACTTTGTGAGAGGATTTTGGGGTGGTTATTTAAAGGACTACATAGATGCAAGTGAACCTTATTTTTCCGTGGGAGAGTACTGGGATTCCCTCAGTTATACATATAGTGAAATGGATCATAATCAAGATGCTCATAGGCAGAGGATAGTTGATTGGATCAATGCCACTGATGGTACCTCTGGTGCATTTGATGTTACAACAAAAGGGATTCTTCACTCTGCATTGGAAAGATGTGAATATTGGCGATTGTCAGATGAGAAGGGAAAGCCTCCAGGCGTTCTTGGGTGGTGGCCATCTCGTGCTGTTACGTTTATAGAGAATCATGACACTGGTTCCACCCAGGGTCATTGGAGATTTCCCAGTGGAAAAGAAATGCAAGGATATGCCTACATTCTTACTCACCCAGGAATTCCATCAGTGTTTTATGACCACATTTCCTCTCACTATAAAACTGAAATAGCAAGTCTAATATCTCTCAGGAAGAGGAACAAGATCCACTGCAGGAGTACAGTTCAAATTAGTAAAGCAGAAAGGGATGTTTACGCAGCAATCATCGATGAAAAAGTTGCTATGAAGATTGGACCTGGACATTTTGAACCACCAAGTGACTACCAGAAATGGTCATTAGCTATTGAGGGAAAAGACTATAAGATTTGGGAAGCATCATAA 2763 0.4177 MSAVALKPLFPLCRREPSFQRHKPIPFRLFFLTCSSNLNDGSSFIFHHQPRRTLSPVHAASLTDTPVLHSLQCPHTITNTFQINRTELVEGKIFVRLDHGKGLRDRELTVGCNLPGKWILHWGVTYVDDVGREWDQPPHDMIPPGSVIIKDYAIETPLKKSSLSAEGDMLHEVRIDLKANNGISAINFVLKDEETGAWYKNKRRDFKVSLVNNLKEDTNIIGPKWGFDLWPGNLGQISKMFLKSEADQDDSSESRVREQENNQPEGFYEEVSITKEVLVNNSISVSTKKCYESGAVKDLLHFETDLPGDVVLHWGVCRDDSKRWEVPPPPHPPGTVVFKDRALRTQFWPRDDGKGSSALITLEEEFSGFMFVLKQNENTWFKYYGNDFYIPLSSSSSFLDIGNKEGQSEAMQREVIQEASQKSSFFAFTDTIANEIRNLVTDDSSEKIQKTKSKKAQQSIFQEIGRLAAEAYNIFRSSIPTFSEATAAEPEVTIVESQATTIVVPEASVESETLSLDPKLCSGTGTGYEILCQGFNWESHKSGRWYMELKEMASELASLGFTVVWLPPPTESVSPEGYMPKDLYNLNSRYGNIDELKDLVKRFHEVGIKTLGDAVLNHRCAHYQNQNGIWNIFGGPLNWDDRAVVADDPHFQGRGNKSSGDNFHAAPNIDHSQEFVRKDLTEWLCWLRKEIGYDGWRLDFVRGFWGGYLKDYIDASEPYFSVGEYWDSLSYTYSEMDHNQDAHRQRIVDWINATDGTSGAFDVTTKGILHSALERCEYWRLSDEKGKPPGVLGWWPSRAVTFIENHDTGSTQGHWRFPSGKEMQGYAYILTHPGIPSVFYDHISSHYKTEIASLISLRKRNKIHCRSTVQISKAERDVYAAIIDEKVAMKIGPGHFEPPSDYQKWSLAIEGKDYKIWEAS 920
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo8g01083 920 PANTHER ALPHA-AMYLASE 510 919 - -
Pumo8g01083 920 Gene3D Glycosidases 529 862 - -
Pumo8g01083 920 CDD AmyAc_arch_bac_plant_AmyA 530 869 - -
Pumo8g01083 920 Pfam Alpha amylase, catalytic domain 556 816 IPR006047 GO:0005975
Pumo8g01083 920 Gene3D - 863 919 IPR013780 -
Pumo8g01083 920 SMART aamy 529 858 IPR006047 GO:0005975
Pumo8g01083 920 Pfam Alpha-amylase C-terminal beta-sheet domain 860 918 IPR012850 GO:0004556|GO:0005509|GO:0005975
Pumo8g01083 920 MobiDBLite consensus disorder prediction 246 266 - -
Pumo8g01083 920 SUPERFAMILY Glycosyl hydrolase domain 863 918 - -
Pumo8g01083 920 MobiDBLite consensus disorder prediction 246 264 - -
Pumo8g01083 920 SMART alpha-amyl_c2 859 919 IPR012850 GO:0004556|GO:0005509|GO:0005975
Pumo8g01083 920 SUPERFAMILY (Trans)glycosidases 528 843 IPR017853 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo8g01083 Pumo-Chr8 40743101 40751680 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo8g01083 55 920 Glycoside Hydrolase AT1G69830 63.940 0.0 1137
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo8g01083 K01176 - gmx:100810333 1731.46
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo8g01083 8 40743101 40751680 Pumo8g01083 8 40743101 40751680 ECH