Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo8g01014 ATGAAACCCAACTTTTCCCTTTTATCCAAGCTTTTGATACTGCAATATCTATCAGTTCTATGCATTTCTCAGGATTTTGATTTCTTCTACTTTGTTCAGCAGTGGCCAGGAGCATACTGTGACACAAAGCAGAGCTGCTGTTATCCTAAGACTGGGAAACCTGCAGCAGATTTCAGCATTCATGGACTCTGGCCTAACTACAATGATGGCTCATGGCCCTCAAACTGTGACCCTGACAGTGTCTTTGACAAAACTCAGATCTCAGACCTCATTAGCAACATGGAGAAGAATTGGCCATCTCTGAGCTGCCCAAGTAGCAATGGCTTGAGGTTTTGGTCACACGAATGGGAAAAACATGGTACATGTGCCGAATCTGAGCTTGATCAGCGTGAGTACTTTGAAACAACTCTCAAACTCAAGCAAAAAGTAAACCTCCTTCGGATCCTCAAGAATGCAGGGATTGAGCCAGATGATGAATTTTACACCCTAGAGAGCATTTCAGAAGCTATAAAAGAGGGCACTGGGTTTACCCCAGGGATAGAGTGCAATAGAGATTCAGGACGTAACAGTCAACTTTACCAAGTGTACATGTGCGTGGACACTTCTGGGTCAAATCTCATTGAGTGTCCTGTGCTTCCAAGGAGCAAATGTGGTGAACAAATTCAATTTCCCAAGTTTTAA 681 0.4347 MKPNFSLLSKLLILQYLSVLCISQDFDFFYFVQQWPGAYCDTKQSCCYPKTGKPAADFSIHGLWPNYNDGSWPSNCDPDSVFDKTQISDLISNMEKNWPSLSCPSSNGLRFWSHEWEKHGTCAESELDQREYFETTLKLKQKVNLLRILKNAGIEPDDEFYTLESISEAIKEGTGFTPGIECNRDSGRNSQLYQVYMCVDTSGSNLIECPVLPRSKCGEQIQFPKF 226
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo8g01014 226 FunFam Ribonuclease 3 20 226 - -
Pumo8g01014 226 Pfam Ribonuclease T2 family 26 209 IPR001568 GO:0003723|GO:0033897
Pumo8g01014 226 Gene3D - 20 226 IPR036430 GO:0003723|GO:0033897
Pumo8g01014 226 ProSitePatterns Ribonuclease T2 family histidine active site 1. 58 65 IPR018188 GO:0003723|GO:0033897
Pumo8g01014 226 SUPERFAMILY Ribonuclease Rh-like 20 225 IPR036430 GO:0003723|GO:0033897
Pumo8g01014 226 CDD RNase_T2_euk 26 217 IPR033697 -
Pumo8g01014 226 ProSitePatterns Ribonuclease T2 family histidine active site 2. 111 122 IPR033130 -
Pumo8g01014 226 PANTHER RIBONUCLEASE T2 23 218 IPR001568 GO:0003723|GO:0033897
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo8g01014 Pumo-Chr8 38287212 38289421 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo8g01014 K01166 - gmx:100778239 460.685
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo8g01014 8 38287212 38289421 Pumo8g01014 8 38287212 38289421 ECH