Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo8g00949 ATGAGAAGCTCCTGGTTCAATAAATTGTCAATCATTATTGGCCATAGACCCCCTGTGAACTGGTTATTCTTGTGCCTAATCAGCCTGCTTGTGCTGATTGTTGTTCTAGGTTCATCTTCTTCTAATATTGTTGATCCGGCGCCTCATATTCCGGTGTCTCTCATCTACACAAACTATAGGAGGGTTAAGGAGCAAGCCGCGGTTGATTATTTAGAGTTAAGGTCTGTGGCAAGTGGTGTCTCTAGACAAAGAGAATTTGACCTTTGTGGCAAGGAAAGAGAGAATTTTGTGCCTTGTTACAATGTTTCAGCCAATTTGTTAGCAGGGTTTAAAGACGGAGAGGAGTTTGACCGGCATTGTGAACTGTTACTTGAAGGAGAGAGGTGTTTGATTCGCCCTCCTAAGGAATATAAAATTCCCTTGCAATGGCCAACTGGCAGGGATGTCATATGGAGTGGAAATGTGAAGATAACCAAAAACCAATTCCTTTCATCTGGAAGTATGACCAAAAGGTTAATGCTTCTAGAAGAGAATCAAATTGCTTTCCACTCAGAGGATGGACTGATCTATGATGGTATGAAAGACTACTCTCGCCAACTTGCAGAGATGATAGGGTTGGGAAGTGACAATGAGCTTCCTCAAGCTGGTGTTCGCACTATACTAGATGTTAATTGTGGATTTGGTAGCTTTGCAGCTCATTTGGCATCACTGAATATAATGGCAGTTTGTGTTGCTGCATATGAGGCAACAGGTAGCCAAGTTCAGTTGTCCCTTGAGAGAGGCCTTCCTGCTGTGATTGGCAACTTTATTGCAAGACAGCTTCCATACCCTTCATTATCATATGACATGGTTCATTGTGCTCAATGTGGCATCATTTGGGATGAAAAAGATGGAATGTTCCTTATAGAAGTTGACCGTGTTCTTAAACCTGGAGGATACTTTGTGTTAACCTCACCCACAAGCAGCAGGTCACAGGGAAGTTCATCACAAATGAAAAGGAGGAACATGTTGATGCCAATGGAAGAGGTGACCCAGCAACTTTGTTGGACTCTTCTAGCACAGCAAGATGAGACATTCATCTGGCAGAAGACTGCTGATGTTAATTGCTATGCATCTCGAAAGAAGCATGCTATACCATTATGCAAAGAAGATGATGATGCTCAGTCATATTATCGGCCTCTTCAACCATGTATAAGTGGGACCTCTAGCAAGCGCTGGATTGCATTACAGAATAGATCCTCTGGATCTGAATTGAGTTCAGCTGAGCTTAAAATTAATGGAAAGTATTGTTTGTAA 1296 0.4221 MRSSWFNKLSIIIGHRPPVNWLFLCLISLLVLIVVLGSSSSNIVDPAPHIPVSLIYTNYRRVKEQAAVDYLELRSVASGVSRQREFDLCGKERENFVPCYNVSANLLAGFKDGEEFDRHCELLLEGERCLIRPPKEYKIPLQWPTGRDVIWSGNVKITKNQFLSSGSMTKRLMLLEENQIAFHSEDGLIYDGMKDYSRQLAEMIGLGSDNELPQAGVRTILDVNCGFGSFAAHLASLNIMAVCVAAYEATGSQVQLSLERGLPAVIGNFIARQLPYPSLSYDMVHCAQCGIIWDEKDGMFLIEVDRVLKPGGYFVLTSPTSSRSQGSSSQMKRRNMLMPMEEVTQQLCWTLLAQQDETFIWQKTADVNCYASRKKHAIPLCKEDDDAQSYYRPLQPCISGTSSKRWIALQNRSSGSELSSAELKINGKYCL 431
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo8g00949 431 FunFam probable pectin methyltransferase QUA2 178 364 - -
Pumo8g00949 431 PANTHER SAM-DEPENDENT METHYLTRANSFERASE 74 404 IPR004159 GO:0008168
Pumo8g00949 431 CDD AdoMet_MTases 219 317 - -
Pumo8g00949 431 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 134 326 IPR029063 -
Pumo8g00949 431 Gene3D Vaccinia Virus protein VP39 179 361 IPR029063 -
Pumo8g00949 431 Pfam Putative S-adenosyl-L-methionine-dependent methyltransferase 95 404 IPR004159 GO:0008168
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo8g00949 Pumo-Chr8 35004779 35006829 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo8g00949 K23870 - gmx:100799663 784.637
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo8g00949 8 35004779 35006829 Pumo8g00949 8 35004779 35006829 ECH