Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo8g00341 ATGGCTTCCTCAGAAAGCACAAAACTAGAGGGAGTAGTTGGTGGTACTGGGGAGAAGCCCATTCCACTTCATGAAAACGTTCTGCAGAAGCATGCTGCATTCTTTGACAAGAATCACGATGGTGTTATTTACCCATGGGAGACTTTTCAAGGCTTACGCGAAATTGGGAATGGGATCTTGTCATCCGTTGGACTTTCTCTATTCATCAATTTGGGTCTTAGTCAAACCACTCGTCCGGGAAAGTTTCCATCTTTACTTTTCCCAATAGAAATTAAGAATATCCAACTCGCCAAACATGGCAGTGACACTGGAGTCTATGATACTGAAGGAAGGTTTGTTCCTTCAAAATTTGAAGGAATTTTCACCAAACATGCACATACTCATCCAAATGCTTTAACATATGATGAGCTAAAGGAGATGCTAAACGCAAATAGAGAGCCCAAAGATGTCAAAGGAAGGATTGGTGGCTTGGTTGAATGGAAAGTCCTTTACAAACTTGCCAAAGACAAGAATGGCTTACTACAGAAGGAAACAATCCGAGGTGTTTATGATGGAAGCTTGTTTGAAACGTTGAAAAAGGAACATTCTTCACACAAAAAGCATTAA 606 0.4059 MASSESTKLEGVVGGTGEKPIPLHENVLQKHAAFFDKNHDGVIYPWETFQGLREIGNGILSSVGLSLFINLGLSQTTRPGKFPSLLFPIEIKNIQLAKHGSDTGVYDTEGRFVPSKFEGIFTKHAHTHPNALTYDELKEMLNANREPKDVKGRIGGLVEWKVLYKLAKDKNGLLQKETIRGVYDGSLFETLKKEHSSHKKH 201
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo8g00341 201 PANTHER PEROXYGENASE 3-RELATED 20 198 IPR007736 -
Pumo8g00341 201 Pfam Caleosin related protein 25 191 IPR007736 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo8g00341 Pumo-Chr8 11164468 11166581 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo8g00341 16 201 Acyl Lipid Metabolism Gene Families AT1G70670 64.362 1.09e-84 247
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo8g00341 K17991 - gmx:100800915 378.637
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo8g00341 8 11164468 11166581 Pumo8g00341 8 11164468 11166581 ECH