Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo8g00192 ATGGGTCCTCTAACACCCCCACCCACAATGGATATCATCTATGATCTCATTGAAGAGGCCAAGCTTCGTTTTCTATGGTGGGCTCTTTGTATATTCGCCATTTCCTATTTCTTCACTCATACAAGTAAATCAATGTGGATGAATCTTCCCATGTCCATTCTGTTTGTTGCTGGTCTGCGCATTCTTCTGAACAAGGTGGAATTCCGTTGGAAGGTTCAACCACCTAGATTACAGACTTATCTATCTCATTTGGAGAAAAATCAGCTGTCTCTGAATGACGAACGCCTCTCTTGTTCACCTCCCCCTCCCAAATGGAAGAAGAAGATTGATTCTCCTGTTGTGGAGGCTGCCTTGAATGATTTCATTGATTTGATATTGAAGGATTTCGTGATAAATATGTGGTATGCAGACATTACTCCAGATATGGAGTTTCCTGAGCTGATACGTGACTTAATCATGGATGCTATTGCTGAAGTGTCAGTGAGGGTTAAAGAGATAAACCTCGTTGACTTGCTCACAAGGGACATAGTTGATTTAATAGGTGATCATATAGACCTTTTCAGAAGAAATCAAGCTGCCATAGGTGTTGATGTTATGTTAACCTTATCGTCTGAGGAGAGGGATGAAAGATTGAAATTCCATCTGTTGAATTCTAAGGAGCTTCATCCAGCACTAATATCTCCAGAGAGTGAGTACAAGGTTCTTCAGCGGCTAATGAGTGGATTATTAGCTACAGTACTAAGAAAACGAGAAGTTCAATGTCCTGTCGTTCGATCTATAGCTCGAGAAATTTTAACTTGTTTGATATTGCAACCTGTCATGAATTTGGCAAGCCCTGCGTATATCAATGAGCTGATTGAATCCCTTCTACTTATCCTTAATGATGAGGGTATAAATTGGACGGGGGGCAGTGATCATTCAACTAATACAACAACTCATAATCATGGTCATTCTGGTGCTGGGGGTGGACATGATAATCATACAGCCTCTGCTGATTGGGCACAAATGCTGGAGGCTGCAACTCAGAGAAGAACTGAAGTTCTTATGCCTGAGAATCTTGAGGACATGTGGGCAAGAGGAAGGAATTATAGATGGAAACAGCATAAAAAGGCCAAAGCTGTCTTTCAGGACCCTTCTGTGAAAAATCTTGCTACAGATGCAATTCCAGAAGGAAAGTCTTCTCTGCATTCTGTGGGTTCAGACCCCCTCCTAAATGTTGGAGGCACAAATAGGTCAGAGTCTTCACCAGATCCTGACAAGGAATTCTCTTCTGAAGCAGATCATCATGTTGATGAGGTGAAGGATATGAAGGACTTCATTTGTAATAAACATAAGGATCCACTCAAGAGATCTAGCAGTGCTTCTCTTGTGGGAACCCAACCTAATAAGGTAGGGTCCCCAAGGTCAGAGTTCTACACCGCTGAATCTGAGAAACATGGTGAAGGATTTCGAGGAAAGAGTAGTTCTGACATGGTTGTTAGAAGAGAGGCGCATGTTGTTCCCAAGCTTCGCTGCCGGGTGATGGGAGCATATTTTGAGAAACTAGGATCCACTTCTTTTGCTGTCTATTCAATTGCAGTGACTGATGGTCAAGAGAAAACTTGGTTTGTTAGAAGAAGATACAGGAATTTTGAGCGATTGCATCGACATCTAAAAGATATTCCCAATTACACGTTACATTTGCCTCCCAAAAGGATATTTTCCTCAAGCACAGAGGATGCCTTTGTCTATCAGCGTTGCATTCAATTTGATAAATATCTCCAGGACCTCCTATCAATAGCTAATATTGCTGAACAACACGAAGTATGGGACTTTTTGAGTGTTTCCTCAAAGAACTACTCTTTTGGGAAATCTTCTTCAATGATGAGGACCCTGGCAGTTAATGTAGATGATGCCGTGGATGATATTGTACGCCAGTTTAAAGGTGTTTCAGATGGTTTTATTCGAAAAGTTGTTGGTTCATCATCCCCTACTACTGAAGGTTCTTCTACATCAACCAGTAGGAACATGTCCTGGAATGTGGATGAAATGGATAAAAGTATTGCAAGGAAAAATATTTTAGAGAGTGTATTGAGCTCTGATAATGAGGAAGGTGATGAGAATATTGATAAAGAAGTAGCAGAAGATAATGAGTGGAATTCTGACAATGAATTGAGCTCAAAGGATTATTCACAACCACTAATAAACCATGGTAGTGAATCTAGTAACTTGGATCTAGATAGAAAACATGATGCAACAATGGAAGCTAAGGTTGGCAAGGATGTACCAGCTACAAATTTCAATGTAGTTCCTGATAATTTGGAGGACGTTCCACCTGAGTGGACCCCACCTAACGTGACTGTCCCTATTTTGAATTTGGTTGACAACGTATTTCAGCTTAAGAAAAGAGGCTGGCTAAGAAGACAGGTCTTTTGGATATCAAAACAGATATTACAGGTGGTGATGGAAGATGCTATTGATGATTGGCTCCTGAGTGAGATTCATTGGCTCCGCAAAGAGGAGACTGTTGCCCAAGGGATTCGGTGGGTCCAAGATATCCTCTGGCCTGGTGGTACATTTTTTTTAAGAGTACAGACTCCTCAGGTGTTAATTGGTGGCAGTGCATGTGATCAAAAGCCTTTACCAACCATAAGTGAATCTGGTGAAAGCAGGATGTCCAAATCACATTCAGGGTCTTTCGAGCAACAGCTTGAAGCTACTCGTAGAGCAAGTGAATTGAAGAAACTGCTCTTTGATGGAGCTCCATCAGCCTTAGTTGGCTTAATTGGTCAGAAGCAGTACAAACGCTGTGCCAGTGATATATATTACTTTAGTCAGTCTTCTATATGTGTGAAGCAACTTGCTTATTCAATACTTGAACTTCTACTCATATCCATCTTCCCTGAGTTGCGGAATGTTGTCATTAGTGTTCATGAGAATATGCACGTTCACCAACCTGTATAG 2943 0.4125 MGPLTPPPTMDIIYDLIEEAKLRFLWWALCIFAISYFFTHTSKSMWMNLPMSILFVAGLRILLNKVEFRWKVQPPRLQTYLSHLEKNQLSLNDERLSCSPPPPKWKKKIDSPVVEAALNDFIDLILKDFVINMWYADITPDMEFPELIRDLIMDAIAEVSVRVKEINLVDLLTRDIVDLIGDHIDLFRRNQAAIGVDVMLTLSSEERDERLKFHLLNSKELHPALISPESEYKVLQRLMSGLLATVLRKREVQCPVVRSIAREILTCLILQPVMNLASPAYINELIESLLLILNDEGINWTGGSDHSTNTTTHNHGHSGAGGGHDNHTASADWAQMLEAATQRRTEVLMPENLEDMWARGRNYRWKQHKKAKAVFQDPSVKNLATDAIPEGKSSLHSVGSDPLLNVGGTNRSESSPDPDKEFSSEADHHVDEVKDMKDFICNKHKDPLKRSSSASLVGTQPNKVGSPRSEFYTAESEKHGEGFRGKSSSDMVVRREAHVVPKLRCRVMGAYFEKLGSTSFAVYSIAVTDGQEKTWFVRRRYRNFERLHRHLKDIPNYTLHLPPKRIFSSSTEDAFVYQRCIQFDKYLQDLLSIANIAEQHEVWDFLSVSSKNYSFGKSSSMMRTLAVNVDDAVDDIVRQFKGVSDGFIRKVVGSSSPTTEGSSTSTSRNMSWNVDEMDKSIARKNILESVLSSDNEEGDENIDKEVAEDNEWNSDNELSSKDYSQPLINHGSESSNLDLDRKHDATMEAKVGKDVPATNFNVVPDNLEDVPPEWTPPNVTVPILNLVDNVFQLKKRGWLRRQVFWISKQILQVVMEDAIDDWLLSEIHWLRKEETVAQGIRWVQDILWPGGTFFLRVQTPQVLIGGSACDQKPLPTISESGESRMSKSHSGSFEQQLEATRRASELKKLLFDGAPSALVGLIGQKQYKRCASDIYYFSQSSICVKQLAYSILELLLISIFPELRNVVISVHENMHVHQPV 980
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo8g00192 980 Gene3D - 504 618 IPR036871 GO:0035091
Pumo8g00192 980 ProSiteProfiles PX domain profile. 501 613 IPR001683 GO:0035091
Pumo8g00192 980 MobiDBLite consensus disorder prediction 651 674 - -
Pumo8g00192 980 MobiDBLite consensus disorder prediction 452 469 - -
Pumo8g00192 980 SMART PXA_3 111 294 IPR003114 -
Pumo8g00192 980 MobiDBLite consensus disorder prediction 390 428 - -
Pumo8g00192 980 MobiDBLite consensus disorder prediction 304 328 - -
Pumo8g00192 980 MobiDBLite consensus disorder prediction 472 488 - -
Pumo8g00192 980 MobiDBLite consensus disorder prediction 398 413 - -
Pumo8g00192 980 Pfam PXA domain 111 289 IPR003114 -
Pumo8g00192 980 CDD PX_SNX19_like_plant 503 607 - -
Pumo8g00192 980 MobiDBLite consensus disorder prediction 449 488 - -
Pumo8g00192 980 MobiDBLite consensus disorder prediction 705 738 - -
Pumo8g00192 980 Pfam Sorting nexin C terminal 798 941 IPR013937 -
Pumo8g00192 980 Pfam PX domain 531 608 IPR001683 GO:0035091
Pumo8g00192 980 SMART PX_2 499 609 IPR001683 GO:0035091
Pumo8g00192 980 MobiDBLite consensus disorder prediction 717 734 - -
Pumo8g00192 980 SUPERFAMILY PX domain 503 610 IPR036871 GO:0035091
Pumo8g00192 980 ProSiteProfiles PXA domain profile. 111 290 IPR003114 -
Pumo8g00192 980 MobiDBLite consensus disorder prediction 414 428 - -
Pumo8g00192 980 PANTHER PX SERINE/THREONINE KINASE PXK 107 976 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo8g00192 Pumo-Chr8 6129473 6146376 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo8g00192 K17925 - gmx:100804013 1735.31
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo8g00192 8 6129473 6146376 Pumo8g00192 8 6129473 6146376 ECH