Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo8g00167 ATGCCAGAGGTTTACACTGTGAAGGTTGAGGAGGGAAAGCCTGCAACTGATGGAAAGCCATCAGTAGGTCCTGTCTATAGGAGCATTTATGCTAAAGATGGTCTTTTGGAGGTTCCTTCTGATTTGGAGTCCCCTTGGGATTTCTTCAGGGACTCTGTTAAGAGGAACCCCAACAATAATATGCTGGGTAGGCGTCAAAAAACCGAATCTAAGGTGGGTTCCTATACATGGCTCACGTATCAAGATGCTTATGATGTTGCCCTGAAAATGGGTTCTGCCATGAGGAGCCGTGGTGTCAATCCTGGAGATCGTTGTGGCATTTATGGGTCCAACTGCCCTGAATGGATCATTGCAATGGAGGCTTGCAATAGCTGTGCAGTGTCATATGTTCCATTGTATGACACCCTTGGTCCTAATGCAGTGGAGTTTATAATAAATCATGCTGAAGTTTCAATTGCATTTGTACAGGACAAAAAGATTCCATCAATTCTGTCATGTCTTGCACAGTGTTCTTCAAATCTTAAAACTATTGTAAGCTTTGGAAGTGTTTCAACCACACAAAAGAAGGAAGCTGAGGAGCATGGTGTGTCCTGCTTCTCATGGGAAGAGTATCTCCAGCTGGGATGTCTGGACTGGGATCTACCATCAAAAAAGAAGACTGACATTTGCACAATAATGTACACAAGTGGAACAACTGGAGATCCCAAAGGTGTCGTTATTAAGAATGAGGCTTTCATGGCCGAAGTGTTGTCTGTTGACCACATAATCATGTTAACAGACAGAGTGGCAGGAGAAGACGATGTGTACTTTTCCTTTCTTCCTCTTGCTCATGTGTATGACCAAATAATGGAGACCTATTGCATCTCCAAGGGCTCATCAATTGGATTTTGGCAAGGCGATGTCAGGTTCTTGCTGGAAGATATTCAGGTTCTGAAACCAACTATATTTTGTGGTGTTCCTAGAGTTTTTGACCGTATTTATTCTGGTATCAAAAGCAAAGTATCTTCTGCAGGACTACTGCAGAGTACATTGTTTCAGTGTGCTTACAACTACAAGTTAAGAAATCTGGAGAAGGGTCTTCCACAACACAAAGCAGCACCTCTGTTTGATAGGCTTGTGTTTGATAAGACAAAACTAGCACTAGGTGGACGTGTTCGCATCCTGTTATCAGGAGCTGCTCCTTTGCCTAGACACGTGGAAGAGTTTATGAGGGTCACCAGTGGATCTACATTATCACAAGGATATGGTCTTACTGAAAGTTGTGCTGGGTGTTTCACAGCGATAGGTGATGTGTATTCTATGACAGGAACAGTTGGAGTCCCCATGACAACCATTGAGGCTAGGCTTGAATCTGTGCCAGAGATGGGATATGATGCCCTCTCCAATGAAGCCCGTGGAGAAATTTGTCTGAGAGGAAATACCTTGTTCTCCGGTTATCACAAGCGTGAAGATCTTACCAAAGAAGTTATGGTTGATGGCTGGTTTCATACAGGTGACATTGGAGAATGGCAACCAAATGGAGCCATGAAAATTATTGATAGGAAGAAGAATATCTTTAAATTGTCTCAAGGAGAATATATTGCTGTGGAGAATATTGAAAACAAGTATTTGCAATGCCCCCTTATAGCATCGATTTGGGTGTATGGAAACAGCTTTGAGTCATTCTTGGTGGCTGTTGTGGTCCCTGAAAGAAAGGCCATTGAGGATTGGGCAAAAGAGCACAATGTGACTGATGATTTTAAATCTTTATGTGATAATCTAAAAGCAAGAAAGTACATTTTGGATGAGCTCAACAGCACTGGTCAGAAACACCAAGTACGTCTATATAATTCATTATCATATGCATTTATGATATATTTTGCCTGTGTTGCCAACATCTGA 1881 0.4216 MPEVYTVKVEEGKPATDGKPSVGPVYRSIYAKDGLLEVPSDLESPWDFFRDSVKRNPNNNMLGRRQKTESKVGSYTWLTYQDAYDVALKMGSAMRSRGVNPGDRCGIYGSNCPEWIIAMEACNSCAVSYVPLYDTLGPNAVEFIINHAEVSIAFVQDKKIPSILSCLAQCSSNLKTIVSFGSVSTTQKKEAEEHGVSCFSWEEYLQLGCLDWDLPSKKKTDICTIMYTSGTTGDPKGVVIKNEAFMAEVLSVDHIIMLTDRVAGEDDVYFSFLPLAHVYDQIMETYCISKGSSIGFWQGDVRFLLEDIQVLKPTIFCGVPRVFDRIYSGIKSKVSSAGLLQSTLFQCAYNYKLRNLEKGLPQHKAAPLFDRLVFDKTKLALGGRVRILLSGAAPLPRHVEEFMRVTSGSTLSQGYGLTESCAGCFTAIGDVYSMTGTVGVPMTTIEARLESVPEMGYDALSNEARGEICLRGNTLFSGYHKREDLTKEVMVDGWFHTGDIGEWQPNGAMKIIDRKKNIFKLSQGEYIAVENIENKYLQCPLIASIWVYGNSFESFLVAVVVPERKAIEDWAKEHNVTDDFKSLCDNLKARKYILDELNSTGQKHQVRLYNSLSYAFMIYFACVANI 626
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo8g00167 626 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 20 611 - -
Pumo8g00167 626 ProSitePatterns Putative AMP-binding domain signature. 225 236 IPR020845 -
Pumo8g00167 626 Gene3D - 34 514 IPR042099 -
Pumo8g00167 626 Pfam AMP-binding enzyme C-terminal domain 532 573 IPR025110 -
Pumo8g00167 626 Pfam AMP-binding enzyme 51 522 IPR000873 -
Pumo8g00167 626 SUPERFAMILY Acetyl-CoA synthetase-like 40 581 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo8g00167 Pumo-Chr8 5662366 5668834 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo8g00167 5 607 Acyl Lipid Metabolism Gene Families AT1G64400 56.033 0.0 743
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo8g00167 K01897 - gmx:100779735 1192.18
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo8g00167 8 5662366 5668834 Pumo8g00167 8 5662366 5668834 ECH