Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo7g02248 ATGGCTCTGAATTTGCCCTCTCCAGCTCAAGTGAAGCCCTTATTTTTCTCATCAAATAACTCCACAAAACTTCCAGGTAGCTTTTCTTTGAAGAGAAAAGATAGTGACACAACAGTAGAGAGACGAGTTTATTGCTCTGCTGCCGCTCAATCACCACCACCAGCATGGCCAGGAACAGCTATTCCAGAGCCTTCTGATTTCAAGACATGGGATGGGCCAAAACCTATTTCTATCTTAGGATCTACTGGCTCAATTGGAACTCAGACACTGAGTATAGTGGCTGAGTTTCCAGAAAGATTTAAAGTTGTAAGCCTTGCTGCTGGGTCCAATATTACTCTTCTTGCTGACCAGATAAAGACATTTAAGCCTGAAGTTGTTGGTCTCAGAAATGAGTCATTAATTGATGAACTCAAAGAGGCTTTGGCTGATGTGGAACACAAACCCGAAATCATCCCTGGAGAGCAAGGAGTCATTGAGGCTGCTCGTCACCCTGATTCAGCCACTGTAGTTACAGGAATAGTTGGTTGTGCAGGACTAAAGGTTGCTGCAATTGAAGCAGGGAAAGACATAGCATTGGCCAACAAAGAGACTATGATTGCAGGAGCCCCTTTTGTTCTTCCTCTTGCTCACAAACATAACATAAAAATTCTTCCCGCAGATTCAGAACATTCTGCCATTTTTCAGTCTATCCAGGGGTTGCCAAAGGGTGCACTTAGGAAAATCCTTTTAACTGGATCAGGAGGTGCTTTCAGAGAATGGCCTGCTGAAAAGATGAAAGACATCAAACTTGCTGATGCATTAAAGCATCCCATATGGAGTTTAGGGAGAAAAATAACTATTGACTCTGCTACCCTTTTCAACAAGGGTCTAGAAGTAATTGAAGCACATTACTTGTTTGGAGCAAGCTATGATGATATTGAGATTGTTATTCATCCACAATCTATCATACATTCCTTGGTTGAAACACAGGATTCATCTGTTATTTCACAGTTGGGGATACCTGACATGCGCTTACCGCTCCTTTATACATTATCTTGGCCAGAAAGAATCTATTGTTCTGAAGTAACTTGGCCTCGCCTTGATCTTAGCAAGTATGGTTCTCTAACATTTTTTGCACCTGATGATAAGAAGTTTCCATCGGTGAATCTTTGCTATGCTGCGGGACGTGCTGGAGGCACCATGACAGGAGTCCTTAGTGCAGCAAATGAGAAAGCTGTAGAAATGTTTGTTGAAGAAAAGATTAGTTACCTGGATATATTCAAGGTTGTGGAACTAACATGCCAGGAACATCAAAAAGAATTAGTAGTAGCTCCTTCACTCGAAGAAATTATTCACTATGACCAATGGGCACGACAATATGCTGCTAGTCTGCAAAAAGCTTCAAGTGTTTGA 1392 0.4181 MALNLPSPAQVKPLFFSSNNSTKLPGSFSLKRKDSDTTVERRVYCSAAAQSPPPAWPGTAIPEPSDFKTWDGPKPISILGSTGSIGTQTLSIVAEFPERFKVVSLAAGSNITLLADQIKTFKPEVVGLRNESLIDELKEALADVEHKPEIIPGEQGVIEAARHPDSATVVTGIVGCAGLKVAAIEAGKDIALANKETMIAGAPFVLPLAHKHNIKILPADSEHSAIFQSIQGLPKGALRKILLTGSGGAFREWPAEKMKDIKLADALKHPIWSLGRKITIDSATLFNKGLEVIEAHYLFGASYDDIEIVIHPQSIIHSLVETQDSSVISQLGIPDMRLPLLYTLSWPERIYCSEVTWPRLDLSKYGSLTFFAPDDKKFPSVNLCYAAGRAGGTMTGVLSAANEKAVEMFVEEKISYLDIFKVVELTCQEHQKELVVAPSLEEIIHYDQWARQYAASLQKASSV 463
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo7g02248 463 SUPERFAMILY 1-deoxy-D-xylulose-5-phosphate reductoisomerase, C-terminal domain 364 457 IPR036169 -
Pumo7g02248 463 SUPERFAMILY Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain 196 334 - -
Pumo7g02248 463 Pfam 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain 216 299 IPR013644 GO:0005515
Pumo7g02248 463 PIRSF Dxp_reductoisomrs 73 463 IPR003821 GO:0008299|GO:0030604|GO:0046872
Pumo7g02248 463 Hamap 1-deoxy-D-xylulose 5-phosphate reductoisomerase [dxr]. 76 457 IPR003821 GO:0008299|GO:0030604|GO:0046872
Pumo7g02248 463 Pfam DXP reductoisomerase C-terminal domain 331 452 IPR026877 -
Pumo7g02248 463 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 73 220 IPR036291 -
Pumo7g02248 463 FunFam 1-deoxy-D-xylulose 5-phosphate reductoisomerase, chloroplastic 68 220 - -
Pumo7g02248 463 Gene3D - 67 220 - -
Pumo7g02248 463 PANTHER 1-DEOXY-D-XYLULOSE 5-PHOSPHATE REDUCTOISOMERASE 24 461 IPR003821 GO:0008299|GO:0030604|GO:0046872
Pumo7g02248 463 Pfam 1-deoxy-D-xylulose 5-phosphate reductoisomerase 76 201 IPR013512 GO:0070402
Pumo7g02248 463 NCBIfam 1-deoxy-D-xylulose-5-phosphate reductoisomerase 74 454 IPR003821 GO:0008299|GO:0030604|GO:0046872
Pumo7g02248 463 FunFam 1-deoxy-D-xylulose 5-phosphate reductoisomerase, chloroplastic 376 460 - -
Pumo7g02248 463 Gene3D - 376 461 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo7g02248 Pumo-Chr7 64004471 64012962 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo7g02248 K00099 - gmx:100805316 890.182