Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo7g02235 ATGGCCAAAACAGTGATTTCTCTATTTGTCTTGTTACTCTCATTCACCATATCTAGCGGTGAAATCTCAGGGCAACCAGGGGTGAACTACGGGCAATTAGGGAACAACCTTCCTCCGCCGCGAGTCTCGGTGAGTCTCGTAAAGTCCCTTCTGAAAGCGAAGCGCGTGAAAATCTACGATGCGAACGCGGAAATCCTCGACGCGCTTCGGAACACGGGGATTCTGGTATCGATCATGTTACCGAACCAGCTCCTGGTCAACGCCTCCACCAACCAGACATTCTCGGACCAGTGGGTCCGATCCAACGTCGTGCCCTTCTACCCGGAAACGCTCATCCGATACCTCCTCGTCGGCAACGAACTCATTAGTAGCACAGGCAAGGAAATATGGCCCCACATCGTTCCCGCAATGCACAGAATCGCACACTCCCTCAAAACCTTCCGTTTGCATAAGGTGAAGGTGGGAACTCCCTTCGCCATGGACGTTTTAGCATCGTCGTTTCCCCCCTCAAACGGCACGTTCAGAAACGACATCGTGTTTCAAGTCATAAAGCCCATGTTGAAGTTCCTCCACAAAACGCGATCCTTCTTCTTCTTAGACGTGTACCCGTTTTTCGCGTGGGCTTCGGAACCAACCCACATTGACCTAAGCTACGCTCTCTTCGAGTCCAAAAACAAAACGGTAACGGACCCGATAACGGGGTTGATCTACACCAACCTATTTGACCAGCAGGTTGACGCTGTTTATTTCGCGATGAAACGGGTCGGGTACCCGAGTATTCGGATCTTCATCGCGGAAACGGGTTGGCCCAATGGGGGAGACTTGGACCAAGTTGGCGCGAACGTTCATAACGCTGCCACGTATAATAGAAATATAGTTAAGAAACTTACTCAAAAACCAGTTTTGGGAACCCCGGCTCGACCGGGTTTGGTTCTTCCGACTTTTATATTTTCGCTTTATAATGAGAACCTTAAAACGGGTTTGGGTTCGGAGCGGCATTTCGGGTTATTGTACCCGAACGGGTCGAGGGTTTATGATATCGATCTCTCTGGCCAGACGCCGGAGTCAGAGCTCGCACCAATTCCGCCGGCGGTGGATTATAAGGGGAAGGCGTGGTGCGTGGTGGCGGAGGGGGCGAATGTGACGGCGGTGGCGGCGGCGTTATCGTACGCATGCTCACAAGGAAACGGGACCTGTGACCCGATCCAACCCGGGAAAGAGTGTTTTCAACCCGATTCAGTGGTGGGACACGCTAACTACGCATTCAGTGCTTATTGGGAGCAGTTTAGGCGCGTGGGTGGAACTTGCTTTTTCAATGGACTTGCAACCCAAACCGCAACGGATCCAAGTTATGGATCTTGCAAGTTCCCAAGTGTGACTCTTTGA 1386 0.518 MAKTVISLFVLLLSFTISSGEISGQPGVNYGQLGNNLPPPRVSVSLVKSLLKAKRVKIYDANAEILDALRNTGILVSIMLPNQLLVNASTNQTFSDQWVRSNVVPFYPETLIRYLLVGNELISSTGKEIWPHIVPAMHRIAHSLKTFRLHKVKVGTPFAMDVLASSFPPSNGTFRNDIVFQVIKPMLKFLHKTRSFFFLDVYPFFAWASEPTHIDLSYALFESKNKTVTDPITGLIYTNLFDQQVDAVYFAMKRVGYPSIRIFIAETGWPNGGDLDQVGANVHNAATYNRNIVKKLTQKPVLGTPARPGLVLPTFIFSLYNENLKTGLGSERHFGLLYPNGSRVYDIDLSGQTPESELAPIPPAVDYKGKAWCVVAEGANVTAVAAALSYACSQGNGTCDPIQPGKECFQPDSVVGHANYAFSAYWEQFRRVGGTCFFNGLATQTATDPSYGSCKFPSVTL 461
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo7g02235 461 FunFam Glucan endo-1,3-beta-glucosidase 14 25 354 - -
Pumo7g02235 461 FunFam Glucan endo-1,3-beta-glucosidase 4 366 460 - -
Pumo7g02235 461 ProSitePatterns Glycosyl hydrolases family 17 signature. 260 273 IPR000490 GO:0004553|GO:0005975
Pumo7g02235 461 Pfam X8 domain 372 443 IPR012946 -
Pumo7g02235 461 SMART X8_cls 371 456 IPR012946 -
Pumo7g02235 461 SUPERFAMILY (Trans)glycosidases 27 348 IPR017853 -
Pumo7g02235 461 PANTHER GLUCAN ENDO-1,3-BETA-GLUCOSIDASE BG1-RELATED-RELATED 26 445 IPR044965 GO:0004553|GO:0005975
Pumo7g02235 461 Gene3D Glycosidases 26 355 - -
Pumo7g02235 461 Gene3D - 367 458 - -
Pumo7g02235 461 Pfam Glycosyl hydrolases family 17 27 348 IPR000490 GO:0004553|GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo7g02235 Pumo-Chr7 63332927 63339910 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo7g02235 21 461 Glycoside Hydrolase AT4G14080 51.802 2.17e-177 503
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo7g02235 - - ccaj:109805358 771.926