Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo7g02127 ATGGCCGAATTCCTCGATCTCGAATCCCAAGACGGCGTGCGCATGCCGTGGAACGTGATCCCGGGCACGAGGCAGGACGCCCTGAACGTCGTCGTTCCGGTCTCCGCCGTCTACACCCCCATAAGGCACTTCCCCTCGATGCCGCTCCTCAATTACTCCCCCCTACGGTGCCGCACGTGCCGCTCCGTCCTCAACCCCTTCTGCATCGTCGACTTCGCCGCCAAGATCTGGATCTGCCCCTTCTGCTTCCAGCGCAACCACTTCCCCCCTCACTACGCCTCCATCTCCGACGAGTCCCTCCCCGCCGAGCTCTTCCCGCAGTACACCACCGTCGAATACAACTCCGACGCCGTGGGCCCCACCGCCACCGTTCCTCCCGTCTTCCTCTTCGTGGTTGACACGTGCGTCATCGAGGAAGAGATCGGGTTCCTGCGCTCCGCGCTCGCGCAGGCCGTGGAACTCTTGCCTGAGAACTCGCTCGTTGGACTCATCACGTTCGGGACGTTCGTGCATGTTCACGAATTAGGGTTTGGTGCGGTGCCGAAGACTTATGTTTTCAAGGGATCTAAGGATGTTACGAAAGACCAGCTGCTCGAGCAGATGAGCTTTTTTGCGAAGAAGCCGCGGCCGGCTGTCGGCGTTGTTGCTGGCGCGAGGGACGGGCTCTCCACGGAGAGTATTTCGCGGTTCCTCGTCCCGGCGTCGGAGTGCGAGTTCACTCTCAATTCGGTATTGGAGGAGCTGCAGAAGGATCCTTGGGCGGTGCCGGCGGATCAGCGGGCGGCTCGGTGCACCAGCACGGCACTGAGTATCGCAGCGAGTTTGTTGGGGGCATGTGTCCCTGGCTCTGCTGCTAGAATAATGGCGTTTATTGGGGGACCGGCTACTGAAGGACCTGCTCCTATTGTATCCAAGCAACTTTCTGAACCAATTCGCTCCCACAAGGATCTGGATAAAGATTCTGTGCCACATTTCCATAAATGTGTAAAATTCTATGATGGACTTTCGAAGCAGCTTGTACATCAAGGTCATGTATTAGATCTTTTTGCTGGTGCACTTGATCAGGTTGGAATCGCTGAACTTAAAACTGCCGTTGAAAGAACTGGAGGCCTTGTTGTACTTGCTGAGAGTTTTGGCCATTCAGTGTTCAAGGATTCACTAAGGCATGTTTTCCAATCGGGTGATTATGATTTGGGTCTATCTTCAAATGGAATATTCGAGATAAACTGCTCTAAGGACTTGAAAGTCCAAGGTATTATTGGCCCTTGTGCATCTCTTGAAAAGAAAGGCCCATTATGCTCCGATGTTGTTATTGGTCAAGGGGGTACAAGTGCATGGAAGATGTGTGGCCTTGACAAATCCACATCATTGTGTCTATTTTTCGATGTTGTGAGGAAGGAAAGTCCTGATGCAGCAATGCAGTCCACAAGCAATCAATTTTACTTCCAGTTCTTGACTTATTATCAGAATAACAGTGGGCAAATGAGATTACGGGTTACGACCCTTTCACGTAGATGGGTTACTGGACCAGAAAGTATACAGGACTTGATTGCTGGATTTGACCAAGAAGCAGCTGCTATAGTCATGGCACGCCAAGTCTCTTTCAAAATGGAAACAGAGGCTGAATTTGATCCTATCAGATGGTTGGACAAGGCATTGATAAATTTGTGTTCTCGGTTTGGGGAATTTCAAAAAGACACTCCATCTTCTTTCAGTTTGTCTCCCAGGTTGTCAATATTCCCTCAATTTATGTTTCATTTACGACGCTCTCAGTTTGTTCAGGTCTTTAACAACAGCCCAGATGAGACTGCTTACTTTAGAATGATACTGAACCGTGAAAATGTTACAAATTCTGTTGTCATGGTTCAGCCTTCATTGATTTCTTATTCATTCCATGCTGGTCCTGAACCAGCTCTTCTTGATGTTGCGGCCATTGCTGCTGATAAGATCCTGCTTTTGGATTCATTTTTCACTGTTGTCATTTTTCATGGTTCAACCATTGCTCAGTGGCGTAAGGCTGGATATCATAATGAACCGGAACATCAGGCATTTGCTCAATTGCTACGAGCTCCTCATGATGATGCAGATTTAATAATAAAGGAGAGATTTCCAGTACCTCGCCTGGTTGTTTGTGATCAGCATGGCTCTCAGGCTCGATTTCTACTAGCAAAGTTAAACCCTTCTGCTACTTATAACACTGAATCTTACAATCCCGGAGGGGATATTATCTTTACCGATGATGTTAGCTTTGAGGTCTTCCTGGATCACTTGCAGAGATTAGTAGTTCAATGA 2292 0.4904 MAEFLDLESQDGVRMPWNVIPGTRQDALNVVVPVSAVYTPIRHFPSMPLLNYSPLRCRTCRSVLNPFCIVDFAAKIWICPFCFQRNHFPPHYASISDESLPAELFPQYTTVEYNSDAVGPTATVPPVFLFVVDTCVIEEEIGFLRSALAQAVELLPENSLVGLITFGTFVHVHELGFGAVPKTYVFKGSKDVTKDQLLEQMSFFAKKPRPAVGVVAGARDGLSTESISRFLVPASECEFTLNSVLEELQKDPWAVPADQRAARCTSTALSIAASLLGACVPGSAARIMAFIGGPATEGPAPIVSKQLSEPIRSHKDLDKDSVPHFHKCVKFYDGLSKQLVHQGHVLDLFAGALDQVGIAELKTAVERTGGLVVLAESFGHSVFKDSLRHVFQSGDYDLGLSSNGIFEINCSKDLKVQGIIGPCASLEKKGPLCSDVVIGQGGTSAWKMCGLDKSTSLCLFFDVVRKESPDAAMQSTSNQFYFQFLTYYQNNSGQMRLRVTTLSRRWVTGPESIQDLIAGFDQEAAAIVMARQVSFKMETEAEFDPIRWLDKALINLCSRFGEFQKDTPSSFSLSPRLSIFPQFMFHLRRSQFVQVFNNSPDETAYFRMILNRENVTNSVVMVQPSLISYSFHAGPEPALLDVAAIAADKILLLDSFFTVVIFHGSTIAQWRKAGYHNEPEHQAFAQLLRAPHDDADLIIKERFPVPRLVVCDQHGSQARFLLAKLNPSATYNTESYNPGGDIIFTDDVSFEVFLDHLQRLVVQ 763
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo7g02127 763 FunFam Protein transport protein SEC23 623 727 - -
Pumo7g02127 763 SUPERFAMILY C-terminal, gelsolin-like domain of Sec23/24 624 763 IPR036180 -
Pumo7g02127 763 PANTHER PROTEIN TRANSPORT PROTEIN SEC23 4 762 IPR037364 -
Pumo7g02127 763 Pfam Sec23/Sec24 zinc finger 54 92 IPR006895 GO:0006886|GO:0006888|GO:0008270|GO:0030127
Pumo7g02127 763 Gene3D - 51 110 - -
Pumo7g02127 763 Gene3D Severin 623 727 IPR029006 -
Pumo7g02127 763 Pfam Sec23/Sec24 beta-sandwich domain 403 507 IPR012990 -
Pumo7g02127 763 Gene3D Sec23/Sec24 helical domain 518 761 - -
Pumo7g02127 763 FunFam Protein transport protein SEC23 389 507 - -
Pumo7g02127 763 Pfam Sec23/Sec24 trunk domain 124 390 IPR006896 GO:0006886|GO:0006888|GO:0030127
Pumo7g02127 763 CDD Sec23_C 613 733 IPR037550 GO:0030127|GO:0090114
Pumo7g02127 763 Pfam Sec23/Sec24 helical domain 521 619 IPR006900 GO:0006886|GO:0006888|GO:0030127
Pumo7g02127 763 Pfam Gelsolin repeat 635 721 IPR007123 -
Pumo7g02127 763 SUPERFAMILY beta-sandwich domain of Sec23/24 4 520 - -
Pumo7g02127 763 Gene3D - 8 504 - -
Pumo7g02127 763 FunFam Protein transport protein SEC23 51 110 - -
Pumo7g02127 763 Gene3D von Willebrand factor, type A domain 125 400 IPR036465 -
Pumo7g02127 763 FunFam Protein transport protein SEC23 518 649 - -
Pumo7g02127 763 SUPERFAMILY Helical domain of Sec23/24 521 623 IPR036175 GO:0006886|GO:0006888|GO:0030127
Pumo7g02127 763 SUPERFAMILY vWA-like 124 392 IPR036465 -
Pumo7g02127 763 FunFam Protein transport protein SEC23 125 401 - -
Pumo7g02127 763 SUPERFAMILY Zn-finger domain of Sec23/24 45 114 IPR036174 GO:0006886|GO:0006888|GO:0008270|GO:0030127
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo7g02127 Pumo-Chr7 58696654 58710125 Dispersed/Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo7g02127 K14006 - gmx:100791527 1478.77
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo7g02127 7 58696654 58710125 Pumo7g02127 7 58696654 58710125 ECH