Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo7g02122 ATGAGTGAAATGGAGGGGAGAGAAAGAGAAAGAGAGAGAATGATGGAAGAAATTCCATTATTTTGTGAGAAAATCAAATTGGCTCAGAAAGCAGCCATGGCAAACCGATGGGAAGAGTTCAACAAAATAATGAAGGAAGACAAGGAGAACATACTCAAGCGGTTTGATCTGTTCGAGAACAGTGCCATCCACGTTGCAACACGCTCCAACAAGCCACAACTCCTCAGAGAATTGATAGAGACGTTACCCAAAGAAGAAAGGTGGGGAGCTATGTGCAAGGGAAATCGTGAAGGGAACACTGTTTTGCACGAGGTTGTGTTTTGTAAAAAGAAGAAGATGGCAGATGTTGTGTTTGAGATTGAAGATGAGTTGTTGTTGCAGTTGCAGCAACAATCATCAATAGAGGGAAAAAGGCCATTGGTGGAGCTGAGAAACCACCGAGGTGAAACCCCTTTGTTCATGGCTGCAATGCATGGAAAGCTGAAGATGCTCAAGCATATGGCCAACCGTATAGGCACAAATAATACAGAAGATTTTCGGAAACATTTGCATCGATCTGACAAATATTCTGCTCTTCATGCCAGTGTCATGGGGCAACACTTTGATGTTGCAATTTGGCTAGTAAGAATGAATACAGAACTTGCTATGGAAAAGGATGAGAAGCAATTAACTTGTCTTCAACTACTTGCCAAAATGCCACAGGTTTTTCGAAGCCACACTCACATGGGACCTGTGAAGAGCATCATATATGGCTTGCTTCCTGATGATGGATATGAAATTGAAGATGATGAAAACTTTCAATTATTTAAACACAAAAGAGACATAGAAAATGGTAAAATTGATGAAAGAAAACTCCCCAAATCAGTTATTTCAAAGACCAACTACAAATTTTGGAAACGCTTTGCAAAAGAGTTTGAAGGGATTGATCATATGTGGAAGGAAAAGAAAAAACATAAGTTGGCTGAGTGTCTGACAAATATTTTAGTGCAATATGACTTATCGTGGCAGATATCCCATAATGAGTATAAAAGGACAACAATGATTACAATGCCACGTGATCCTATCAGTGTGGCCAAAAGGAGAAGGATAAGTGCACAAAAAAGAGAAGAGAGGCGTAAGAACGAAGAAGAACCTCCTGAACGCACAACATTACTCATAGCAACTAAAACTGGAATTGTCGAAATTGTTGAAAAATTCCTTGATGTTAATCCGGAGGCTATTTTTCATGTCACTCAGAATAAGCAGAACATATTAACCATGGCTGTTAAGTATCGCCAGAAGGAAATTGTTCGAATCATACAGAGAAAAGGTGTGGTTAAATCATTGGTTGGTCAAATCTCAGACAAAGGTCGTACTATCTTGCATGAAGTTGCAAGGCTGGATTACTACAAAGGAGAACACTTAGCTGGAGTGGCATTCCAACTACAAGATGAGTTGCGTTGGTATGATAAAGTGAGAGGACTGATTCCTAAACACTACAACATGCATTGTGACATAGACGGGCATACACCAGAAGATATGTTAGAAATGGAGCATGATGCAATGCTTAAAGAGGCACAAAAATGGTTAAAGGAAACAGCTCAATCATGCTCTACTGTTGCTATTCTAGTTGCCACAGTTGTATTTGCTGCAGCCTACACCATTCCAGGTGGAACTGAAAATGGTACTCCCGTATTTCTTCATTCTAATGTGTTTCTCTTTTTCACGATCATGGATGTTGTGGCACTTGCTACCTCTCTAGCTTCAGTGGTGGTGTTCCTTTCCATCCTCACTTCCCCATGTGAGTTGTGGGATTTTCACAAGTCTCTCCCACGAAAACTAAATTTGGGATTTGCTTTGTTGTTCTTATCATTAATGACAACAATGTTAGCATTCAGTGCAACCATGCTGCTGACCATTAAATTGGAATGGAAGAATTGGACCTCAACATTGATATACAGTGCTGCTTTCTTTCCTGTCACTATATTTGCAATGATTCAATTCCCTGTTTATGTGATGGCTCGAAGCATCGTCAAGCATCTATGGAAGCAACTTAAGAAGGTCCTTCCAATGAGATTGATTAAACGTTTCACGAATTGA 2079 0.3992 MSEMEGRERERERMMEEIPLFCEKIKLAQKAAMANRWEEFNKIMKEDKENILKRFDLFENSAIHVATRSNKPQLLRELIETLPKEERWGAMCKGNREGNTVLHEVVFCKKKKMADVVFEIEDELLLQLQQQSSIEGKRPLVELRNHRGETPLFMAAMHGKLKMLKHMANRIGTNNTEDFRKHLHRSDKYSALHASVMGQHFDVAIWLVRMNTELAMEKDEKQLTCLQLLAKMPQVFRSHTHMGPVKSIIYGLLPDDGYEIEDDENFQLFKHKRDIENGKIDERKLPKSVISKTNYKFWKRFAKEFEGIDHMWKEKKKHKLAECLTNILVQYDLSWQISHNEYKRTTMITMPRDPISVAKRRRISAQKREERRKNEEEPPERTTLLIATKTGIVEIVEKFLDVNPEAIFHVTQNKQNILTMAVKYRQKEIVRIIQRKGVVKSLVGQISDKGRTILHEVARLDYYKGEHLAGVAFQLQDELRWYDKVRGLIPKHYNMHCDIDGHTPEDMLEMEHDAMLKEAQKWLKETAQSCSTVAILVATVVFAAAYTIPGGTENGTPVFLHSNVFLFFTIMDVVALATSLASVVVFLSILTSPCELWDFHKSLPRKLNLGFALLFLSLMTTMLAFSATMLLTIKLEWKNWTSTLIYSAAFFPVTIFAMIQFPVYVMARSIVKHLWKQLKKVLPMRLIKRFTN 692
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo7g02122 692 PANTHER CASKIN 61 670 - -
Pumo7g02122 692 SMART ANK_2a 187 216 IPR002110 GO:0005515
Pumo7g02122 692 SMART ANK_2a 147 178 IPR002110 GO:0005515
Pumo7g02122 692 SMART ANK_2a 413 442 IPR002110 GO:0005515
Pumo7g02122 692 SMART ANK_2a 97 126 IPR002110 GO:0005515
Pumo7g02122 692 SMART ANK_2a 58 87 IPR002110 GO:0005515
Pumo7g02122 692 MobiDBLite consensus disorder prediction 359 380 - -
Pumo7g02122 692 SUPERFAMILY Ankyrin repeat 380 463 IPR036770 -
Pumo7g02122 692 Pfam Domain of unknown function 520 630 IPR026961 -
Pumo7g02122 692 SUPERFAMILY Ankyrin repeat 49 233 IPR036770 -
Pumo7g02122 692 Gene3D - 354 521 IPR036770 -
Pumo7g02122 692 Gene3D - 4 235 IPR036770 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo7g02122 Pumo-Chr7 58539659 58557619 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo7g02122 381 633 Miscellaneous Gene Families AT3G09550 26.159 5.26e-13 70.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo7g02122 - - gmx:100788731 1208.74