Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo7g02063 ATGGCGTTGTTATGTGGTGGCACGCCATGGTCCAAGGTAATAATAGTTCCTCCCATTTTCCTCCACCACTCTCACACCCCTCGCACCTTCTTCTTCCGACGACGCTGTTTCTCAGTCTCTGCTCTCTCCGAACAACAACCACCACCCGTTCGCGTTCGTTTCGCTCCTTCTCCCACCGGAAACCTCCACGTCGGCGGTGCCCGAACGGCCCTCTTCAACTACTTGTTCGCAAGGTCCAAAGGTGGGAAATTTGTGCTCAGAATTGAGGACACTGACTTGGAGAGGTCCACAAGGGAGTCTGAGGAGGCCATGCTCAAAGATCTTTCTTGGCTTGGACTTGATTGGGATGAAGGGCCTGGTGTTGGAGGGGATTATGGTCCTTATAGGCAGTCTGAGAGGAATTCTTTATACAAACAACATGCGGAGAACCTACACGAATCCGGTCTTGTTTATCGCTGCTTCTGTTCTAATGAGGAACTAGAGAAAATGAAGGAGGATGCTAAACTAAAGCAACTGCCTCCAGTGTACACAGGTAAATGGGCTAGTGCGACAAATGAGGAAGTAGAAGAAGAGCTGGCAAAAGGAACTCCTTATACATACCGGTTTCGAGTCCCTAAAGGAAGTTTAAAAATTAATGACCTAATACGAGGCGAAGTTAGTTGGAACTTGGATACGCTTGGAGATTTTGTGATAATGAGGAGTAATGGTCAGCCTGTTTATAACTTTTGTGTAACGGTAGATGATGCTACCATGGCGATTTCCCATGTTATCAGGGCAGAGGAGCATTTACCAAACACTCTAAGGCAGGCATTGATATATAAGGCACTAGGATTTCCCATGCCTTACTTTGCACATGTTTCTTTGATTTTAGCTCCTGATCGGAGTAAATTATCAAAACGACATGGGGCAACATCAGTGGGTCAGTTCCGGGAGATGGGATACCTACCAGAAGCAATGGTGAATTACCTAGCATTATTAGGTTGGGGCGATGGGACTGAAAATGAGTTTTTTACACTTGATCAACTTGTTGAAAAATTCACTATTGAACGTGTTAATAAAAGTGGTGCTATTTTTGACTCAACGAAGTTAAGGTGGATGAATGGTCAGCATTTAAGAGCACGTCCGTCAGAGGAGTTGACCAAACTTATTGGAGAGTACTGGAAGACATCTGGCTTACTCACAGTATCAGATGGGCCATTTATTGATGAAGCAGTTCAACTACTTAAGGATGGGATTGACTTGATAAATGATGCAGACAAGGCTCTTGCTAACTTGCTTTCTTATCCTGTGCATTCTACTTTACAGAGCGATGAAGCAGAATCTGTCTTGCAAGATAATCTCTCTGAATTTGCTGCTAGCCTCTTGGCTGCCTATGATAGTGGTGATCTGGTAGCAGCACTTGAAGAAGGTCATGCCGGCTGGCAGAAGTGGGTGAAAGGCTTTGGAAAATCGCTTAAGCGCAAGGGAAAATCGCTTTTCATGCCGCTCCGACTTCTGTTGACTGGAAAACTCCATGGACCTGACATGGGGGCAAGTGTTGTGTTGCTCTATAAAGCTGGGACTAGTGATGTAGTAGCTCCTAAAGCTGGCTTTGTGACACTGGATGAAAGATTTAAAATGCTTAGGCAAATCAACTGGGAAACATTGTCCAAGGACCAACCTGTCAAAGAGACTGCTGCTCCTGTCTAA 1689 0.4529 MALLCGGTPWSKVIIVPPIFLHHSHTPRTFFFRRRCFSVSALSEQQPPPVRVRFAPSPTGNLHVGGARTALFNYLFARSKGGKFVLRIEDTDLERSTRESEEAMLKDLSWLGLDWDEGPGVGGDYGPYRQSERNSLYKQHAENLHESGLVYRCFCSNEELEKMKEDAKLKQLPPVYTGKWASATNEEVEEELAKGTPYTYRFRVPKGSLKINDLIRGEVSWNLDTLGDFVIMRSNGQPVYNFCVTVDDATMAISHVIRAEEHLPNTLRQALIYKALGFPMPYFAHVSLILAPDRSKLSKRHGATSVGQFREMGYLPEAMVNYLALLGWGDGTENEFFTLDQLVEKFTIERVNKSGAIFDSTKLRWMNGQHLRARPSEELTKLIGEYWKTSGLLTVSDGPFIDEAVQLLKDGIDLINDADKALANLLSYPVHSTLQSDEAESVLQDNLSEFAASLLAAYDSGDLVAALEEGHAGWQKWVKGFGKSLKRKGKSLFMPLRLLLTGKLHGPDMGASVVLLYKAGTSDVVAPKAGFVTLDERFKMLRQINWETLSKDQPVKETAAPV 562
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo7g02063 562 CDD GluRS_core 50 372 IPR033910 GO:0006424|GO:0008270
Pumo7g02063 562 NCBIfam glutamate--tRNA ligase 50 518 IPR004527 GO:0000166|GO:0004818|GO:0005524|GO:0006424
Pumo7g02063 562 SUPERFAMILY An anticodon-binding domain of class I aminoacyl-tRNA synthetases 359 518 IPR008925 GO:0000049
Pumo7g02063 562 FunFam Glutamate--tRNA ligase, mitochondrial 43 374 - -
Pumo7g02063 562 ProSitePatterns Aminoacyl-transfer RNA synthetases class-I signature. 56 67 IPR001412 GO:0000166|GO:0004812|GO:0005524|GO:0006418
Pumo7g02063 562 Gene3D - 431 523 IPR020751 -
Pumo7g02063 562 PRINTS Glutamyl-tRNA synthetase signature 67 78 IPR000924 GO:0000166|GO:0004812|GO:0005524|GO:0043039
Pumo7g02063 562 PRINTS Glutamyl-tRNA synthetase signature 254 262 IPR000924 GO:0000166|GO:0004812|GO:0005524|GO:0043039
Pumo7g02063 562 PRINTS Glutamyl-tRNA synthetase signature 53 65 IPR000924 GO:0000166|GO:0004812|GO:0005524|GO:0043039
Pumo7g02063 562 PRINTS Glutamyl-tRNA synthetase signature 82 95 IPR000924 GO:0000166|GO:0004812|GO:0005524|GO:0043039
Pumo7g02063 562 PRINTS Glutamyl-tRNA synthetase signature 238 248 IPR000924 GO:0000166|GO:0004812|GO:0005524|GO:0043039
Pumo7g02063 562 Pfam tRNA synthetases class I (E and Q), catalytic domain 50 365 IPR020058 GO:0004812|GO:0005524|GO:0043039
Pumo7g02063 562 PANTHER GLUTAMATE--TRNA LIGASE 43 542 - -
Pumo7g02063 562 Hamap Glutamate--tRNA ligase [gltX]. 49 532 IPR004527 GO:0000166|GO:0004818|GO:0005524|GO:0006424
Pumo7g02063 562 Gene3D HUPs 41 374 IPR014729 -
Pumo7g02063 562 FunFam Glutamate--tRNA ligase chloroplastic/mitochondrial 432 525 - -
Pumo7g02063 562 Pfam Anticodon binding domain 379 517 IPR045462 -
Pumo7g02063 562 SUPERFAMILY Nucleotidylyl transferase 50 358 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo7g02063 Pumo-Chr7 56196393 56203056 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo7g02063 K01885 - gmx:100810730 1055.05