Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo7g02060 ATGTTTGGTATTGCCGGTTTCTCGGGTGACTTGTTAGGTGGAAACAAGAATATAGACCATCATCAAGTCTTAAGTTGGAAGCTAGCTCATGAGACTCAGAGAAACACAACACAAGCTGGAGTAGTGAGATGTATGGTATCCTATCATGGATGGGACGATTCTTCATCAAGTTACAAGTTGAGTGGTCAAGTTGTAGTGCTCAATGCTACTTGCTTGCGTTTACACAGTGATATCAACAAGTATATTCCTGGTCCCCATTTTGATCCTCCGTCAAAAGACAGAGTCAAACAAGTCATCAAGAACTGTGATACCAACGAGGATAAGCAAATTAATCGTGACGAATTTTTCCGTTTCATCGAGCAAATGGCACCTGAAACATTCAATGTTGTTCGTAAAAAACTTGTTGCCACTTTGGTTGCAGCACCAACAATTGCAGCGGCAACAAAGAAAGCTACTGAACGTGTCCCAGTTGTTGGGAAACTGGTGAAATGGTTACCCAAAGCAGTTTATGCTCTCCTTATGACAATTGCAGCTGTGTGGTACCAAGAGGATGGTCCGGATTCTGCACACTAG 573 0.4258 MFGIAGFSGDLLGGNKNIDHHQVLSWKLAHETQRNTTQAGVVRCMVSYHGWDDSSSSYKLSGQVVVLNATCLRLHSDINKYIPGPHFDPPSKDRVKQVIKNCDTNEDKQINRDEFFRFIEQMAPETFNVVRKKLVATLVAAPTIAAATKKATERVPVVGKLVKWLPKAVYALLMTIAAVWYQEDGPDSAH 190
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo7g02060 190 SUPERFAMILY EF-hand 89 130 IPR011992 -
Pumo7g02060 190 ProSitePatterns EF-hand calcium-binding domain. 103 115 IPR018247 -
Pumo7g02060 190 Gene3D - 68 134 - -
Pumo7g02060 190 ProSiteProfiles EF-hand calcium-binding domain profile. 90 125 IPR002048 GO:0005509
Pumo7g02060 190 PANTHER CALCIUM ION-BINDING PROTEIN 67 181 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo7g02060 Pumo-Chr7 56166933 56170841 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo7g02060 67 184 EF-hand Containing Proteins AT1G64850 53.390 3.69e-43 140
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo7g02060 - - gmx:100782930 177.948