Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo7g01985 ATGGAGGTGCTGTCTCCATTTAAGGATGGAATTGTTGCTGACTGGGATATTGTTGACAGCATATGGGATCATGCCTTCAGGGAGTGCCTATTGATTGATCCTAAAGAGCATCCTATGCTCCTTGCAGAGCCCTCTTCTAACTCTCAACAACAGAGAGAAAGGACAGCGGAGCTTATGTTTGAGAAGTACAAAGCACCTGCATTGTTTTTGGCAAAGAATGCTGTTCTGACTTCTTTTGCTTCAGGGCGTGCTACGTCATTAGTTGTTGATGGTGGTGGAGGCTCAACTACAGTTGCACCGGTACATGATGGTTATGTTCTTCAAAAGGCTGTGGCAACCTCTCCAATTGGAGGAGAATTTCTTACAGACTGCTTGACGAAAAGCTTGGAAAGCAAGGGTATTACGATAAAACCACGGTATTCCTTTAGGAGAAAGGAAATACGCCCTGGAGAGTTTCAGACAGTAGATCTTGATTTTCCAAATATTACTGAAAGCTACAAACTCTATTCCCAGAGGGTTATTGCTAGTGATATCAAGGAATGTGTGTGCCGTGCTCCAGATACCCCATATGATGAGAGTGCATATTCAAACATCCCAATGACCTCATATGAGCTTCCTGATGGCCAGACAATTGAAATTGGAGCTGACAGATTTAAGATTCCAGATGTTCTTTTCAATCCATCCCTGGCTAAGTCAATTCCTGGCATGGAGAGCTTTGCAGAAATTGCTCCTTCAGTTCGTGGCCTGCCTCAAATGGTGATTGAAAGCATTAATAAGTGTGATGTAGACATTCGAAGAGAGTTGTTTAGTAGTATACTGCTTGCTGGTGGTACAGCTTCAATGCAACAACTAAAGGAGCGCCTTGAGAAAGACTTGCTAGAGGAGTCTCCTCAAGCTGCCAGAGTAAAAGTATTGGCCAGTGGAAATGCTACTGAAAGAAGGTTTAGTGTTTGGATAGGGGGTAGTATATTGGCATCTCTTGGCTCCTTCCAGCAAATGTGGTTCTCCAAATCCGAGTATGAAGAGCATGGAGCTTCATATATCCAAAGGAAGTGTCCATGA 1062 0.436 MEVLSPFKDGIVADWDIVDSIWDHAFRECLLIDPKEHPMLLAEPSSNSQQQRERTAELMFEKYKAPALFLAKNAVLTSFASGRATSLVVDGGGGSTTVAPVHDGYVLQKAVATSPIGGEFLTDCLTKSLESKGITIKPRYSFRRKEIRPGEFQTVDLDFPNITESYKLYSQRVIASDIKECVCRAPDTPYDESAYSNIPMTSYELPDGQTIEIGADRFKIPDVLFNPSLAKSIPGMESFAEIAPSVRGLPQMVIESINKCDVDIRRELFSSILLAGGTASMQQLKERLEKDLLEESPQAARVKVLASGNATERRFSVWIGGSILASLGSFQQMWFSKSEYEEHGASYIQRKCP 353
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo7g01985 353 Gene3D Actin; Chain A, domain 4 116 238 - -
Pumo7g01985 353 Pfam Actin 1 352 IPR004000 -
Pumo7g01985 353 Gene3D - 74 316 - -
Pumo7g01985 353 SMART actin_3 1 353 IPR004000 -
Pumo7g01985 353 PRINTS Actin signature 51 64 IPR004000 -
Pumo7g01985 353 PRINTS Actin signature 20 38 IPR004000 -
Pumo7g01985 353 PRINTS Actin signature 76 95 IPR004000 -
Pumo7g01985 353 PANTHER ACTIN 5 346 IPR004000 -
Pumo7g01985 353 SUPERFAMILY Actin-like ATPase domain 82 352 IPR043129 -
Pumo7g01985 353 SUPERFAMILY Actin-like ATPase domain 2 89 IPR043129 -
Pumo7g01985 353 CDD NBD_sugar-kinase_HSP70_actin 8 112 - -
Pumo7g01985 353 Gene3D - 3 346 - -
Pumo7g01985 353 FunFam actin-related protein 4 295 353 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo7g01985 Pumo-Chr7 53267066 53278125 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo7g01985 6 352 Miscellaneous Gene Families AT3G53750 38.286 4.67e-81 250
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo7g01985 K11340 - gmx:100785066 679.093