Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo7g01962 ATGGCTGCAACCAGGGCTCGAGTTAGTAGCTTCTCTCGCAATGTATCAACTGCAACATCTCAGAATACTGGACTTAAGCGTGGCCCTAATGGGACAATGTTCATTTCATCTGGGATTCCAGATCTGGATAAGATTTTAGGTGGTGGTTTTTCTCTGGGTAGCCTTGTCATGGTTATGGAAGATCCAGAAGCACCTCATCATATGCTTCTATTGAGAAATTTTATGTCTCAAGGACTTGTTCAAAAACAGCCACTCTTGTATGCTAGTGCATCTAGAGATCCTAAAAGTTTTCTTGGTACTTTGCCTAGTCCGGCATCACTCAAAGGGGATAAATCTTCAGATCTTAGTCATGAAAAGGATCTAAGAATTGCTTGGCAATACAAAAAGTACTTTGGTGAGCCTCAGCTAAATCTGAACACCAATAATGGTGGTCAGCATGATTATTGTAATGATTTTGACTTGAGAATGCCCCTGGACCGGCAATTTTTTAGTGGCAATAATGTGGATTGTGTTAGCATCAAAGATTCTCCTAACCTTACTGCTCTTCAAGATCGTTGTGCTGGATTTCTAGCTAAATTCTCAAGAAATGAAGGCAGCATTTCCTCTGCTGGTCGTATTGCAATTCAATCATTTTGTTCTCCACAATGCAAGTATTCAAATGAGGAGTGGCATATGCTTTCCTTTATTAGGTCCCTAAAGGGCATGGCTCGGTCTTCAAACGCTGTTGTTGTTGTAACCTTTCCACCTTCACTTCTTTCTCCATCTTGTTCAAAAAGATTGCAGCATATGGCAGACACCTTGCTTTCTGTCAAAGCCATTCCAGATGAGGACAAGGAACTTGCAAAACTCCTCACTGGTTACCAGGATATGATTGGGCTTTTAAATGTACACAAAGTTGCACGGTTAAATACACAGGTTCCTGTGATTCTGGAGGCCACAACATTCTCAATAAAATTGCAAAAACGGAGGTTTTTGGTTTTGGAATGTCTAAATCAAGCCCCAGTTGACGGTTCAAGTGGAAGTTCATATGGCACATCTGGTGGTTGTTCTGGGTCAACCTAA 1062 0.4134 MAATRARVSSFSRNVSTATSQNTGLKRGPNGTMFISSGIPDLDKILGGGFSLGSLVMVMEDPEAPHHMLLLRNFMSQGLVQKQPLLYASASRDPKSFLGTLPSPASLKGDKSSDLSHEKDLRIAWQYKKYFGEPQLNLNTNNGGQHDYCNDFDLRMPLDRQFFSGNNVDCVSIKDSPNLTALQDRCAGFLAKFSRNEGSISSAGRIAIQSFCSPQCKYSNEEWHMLSFIRSLKGMARSSNAVVVVTFPPSLLSPSCSKRLQHMADTLLSVKAIPDEDKELAKLLTGYQDMIGLLNVHKVARLNTQVPVILEATTFSIKLQKRRFLVLECLNQAPVDGSSGSSYGTSGGCSGST 353
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo7g01962 353 FunFam Elongator complex protein 4 17 336 - -
Pumo7g01962 353 PANTHER PAX6 NEIGHBOR PROTEIN PAXNEB 3 343 IPR008728 GO:0002098|GO:0033588
Pumo7g01962 353 Pfam PAXNEB protein 20 342 IPR008728 GO:0002098|GO:0033588
Pumo7g01962 353 CDD Elp4 24 273 - -
Pumo7g01962 353 Gene3D - 18 336 IPR027417 -
Pumo7g01962 353 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 35 272 IPR027417 -
Pumo7g01962 353 MobiDBLite consensus disorder prediction 1 30 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo7g01962 Pumo-Chr7 52967252 52972398 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo7g01962 K11375 - gmx:100799237 648.277