Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Pumo7g01961 | ATGTTCACTAAGTATTTGCAAGATGTGTTTAAGGTTCCTCTGGTTATACAGCTCACTGATGATGAGAAGTTCTTCTGGAAAAATCTTTCTATAGAAGAGTGCCGAAGACTTGCAAGGGAGAATGCAAAGGACATCATTGCTTGTGGTTTTGACATTTCAAAGACGTTCATCTTCTCTGATTTCAATTATGTTGGCGGTTCCTTCTACAAGAACATGTGTGAGGTCGGAAAGCGTGTGACTTATAACCAGGCTGTTGGCATATTTGGTTTCGCCGGGGAAGATCATATTGGAAAAGTTAGTTTTCCACCTGTGCAGGCAGTTCCATCATTTCCTAGCTCATTTCCTCACCTATTTTCTGGAAAAGAGAATCTTCGTTGTTTAATTCCTTGTGCAATTGACCAGGATCCATATTTTAGAATGACACGTGACGTTGCTCCTAAAATGGGTTTCCACAAGCCAGCCTTGATTGAATCATTATTCTTCCCTGCATTACAGGGGGAGACAGGAAAAATGTCTGCCAGTGATCCCAATTCTGCAATATATGTGACTGATTCTGCAAAAGATATAAAGAACAAGGTAAACAGACATGCATTTTCTGGTGGGCAAGATTCTATAGAGAAACATAGGCAATTAGGGGCAAATCTTGAGGTAGATATACCAGTCAAATACCTTACATTTTTCCTAGAAGATGATGATGAACTTGAACACATCAAGAAGGAATATGGAGAAGGGCGCATGTTAACTGGTGAGGTAAAGCAGCGGCTAATTCAAGTTTTGACTGAACTAGTGGAGAGGCATCGCAGGGCTCGGGCTTCTGTGACTGAAGAGATGGTGGATGCATTTATGGCTATCAGACCACTTCCCCACATGTTTGACTGA | 879 | 0.4141 | MFTKYLQDVFKVPLVIQLTDDEKFFWKNLSIEECRRLARENAKDIIACGFDISKTFIFSDFNYVGGSFYKNMCEVGKRVTYNQAVGIFGFAGEDHIGKVSFPPVQAVPSFPSSFPHLFSGKENLRCLIPCAIDQDPYFRMTRDVAPKMGFHKPALIESLFFPALQGETGKMSASDPNSAIYVTDSAKDIKNKVNRHAFSGGQDSIEKHRQLGANLEVDIPVKYLTFFLEDDDELEHIKKEYGEGRMLTGEVKQRLIQVLTELVERHRRARASVTEEMVDAFMAIRPLPHMFD | 292 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Pumo7g01961 | 292 | Pfam | tRNA synthetases class I (W and Y) | 132 | 262 | IPR002305 | GO:0000166|GO:0004812|GO:0005524|GO:0006418 | |
| Pumo7g01961 | 292 | CDD | TrpRS_core | 1 | 262 | IPR002306 | GO:0000166|GO:0004830|GO:0005524|GO:0006436 | |
| Pumo7g01961 | 292 | PANTHER | TRYPTOPHANYL-TRNA SYNTHETASE | 1 | 288 | - | - | |
| Pumo7g01961 | 292 | FunFam | Tryptophan--tRNA ligase, cytoplasmic | 175 | 292 | - | - | |
| Pumo7g01961 | 292 | Gene3D | HUPs | 1 | 173 | IPR014729 | - | |
| Pumo7g01961 | 292 | PRINTS | Tryptophanyl-tRNA synthetase signature | 44 | 63 | IPR002306 | GO:0000166|GO:0004830|GO:0005524|GO:0006436 | |
| Pumo7g01961 | 292 | PRINTS | Tryptophanyl-tRNA synthetase signature | 126 | 147 | IPR002306 | GO:0000166|GO:0004830|GO:0005524|GO:0006436 | |
| Pumo7g01961 | 292 | PRINTS | Tryptophanyl-tRNA synthetase signature | 170 | 180 | IPR002306 | GO:0000166|GO:0004830|GO:0005524|GO:0006436 | |
| Pumo7g01961 | 292 | NCBIfam | tryptophan--tRNA ligase | 1 | 282 | IPR002306 | GO:0000166|GO:0004830|GO:0005524|GO:0006436 | |
| Pumo7g01961 | 292 | Gene3D | - | 174 | 291 | - | - | |
| Pumo7g01961 | 292 | SUPERFAMILY | Nucleotidylyl transferase | 1 | 285 | - | - |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Pumo7g01961 | K01867 | - | gmx:100787194 | 584.334 |