Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo7g01943 ATGGCTCCATTCCTCTTGTTTGCTTTGGTGTTTGCTAGCCAACTGATGGCTGGATTCAATACACCGTTACCACCTCCCCTCTATGGAGATCACGTATCCATTCTCAGCATAGACGGTGGTGGTATCAGAGGGATTATTCCCGCAACTGTTCTTGAATACTTGGACGAGAAACTTAAGGTCCATGATAATCTATTTATGCTAAGGACCCAAAAACATCTCTTGGCACATTATTTTGATGTGATATCAGGAACTAGTACTGGTGGACTCATGACTGCTATGTTAGCAGCCCCAAACCCATCTGACACCAGTAGTCCTCTCTTTACTCCCTCGGGAATCGTACAGTTCTACAAGGAAAATGGCCCTGAAATATTTCATGAAAAATTTCGCTTTCCGTGCAGTCCCAAGTATGATGGACAGTCCTTACAAAAGATAGTTCGTTCGTATTTGAAAGAAACACGACTGAATCAAACATTGACGAATGTGGTAATACCAACTTTCGACAGGAGTAAAATCAAGCCTGTTATATTCTCAAACTATAAGCTCAAGCCAGGAACTTACTTAAATGCCAAACTCTCAGACATATGCCTCGGGACTTCGGCTGCACCGACTTATTTTCCAGCCTACAATTTTCAGAATGACGGTCATAAATTTGATTTGGTTGATGGTGCTTTGGATGCTAATAATCCAGACCAGAAAGAAATCCTGTTGCTGTCATTAGGAACTGGAACAACAAAAGCTGAGGAGAAGTTATCTGGCATCTTTGATGATATGTGTTGGCTAGTCAATAACAAAGATGTTCTTAAAGAGGCTATATTTAGAACAGACATGATCCAATACTACCTTGCCACAGTGTTCCCGGGGCTCTTGTCTGCAGATAACTATCTTCGAATTGAGGAGTATAACCTGGATCCATCCATGGAAGCAATTGATAATGCTAAAACGAAAAACATGAATAAACTTGAGAAGCTAGGAAAGTGCCTGTTGAGCCAAAAAGTTAAGAGGATGAATGTGAATACTTTTATCCCAGTTGAACTAAACCAAACAAATGCTGCAGCTCTTGACAGGTTGGCTGAGAAACTATATGCAGAGAGGCAGTTGCGTCTGAAAAGAAAATCAATGGCAAAAGGAGGAAGCCCAATTATTGAAACTGTGAAAGTCCCTTCCGGCCAAATCCGAGCAACTTAA 1185 0.4127 MAPFLLFALVFASQLMAGFNTPLPPPLYGDHVSILSIDGGGIRGIIPATVLEYLDEKLKVHDNLFMLRTQKHLLAHYFDVISGTSTGGLMTAMLAAPNPSDTSSPLFTPSGIVQFYKENGPEIFHEKFRFPCSPKYDGQSLQKIVRSYLKETRLNQTLTNVVIPTFDRSKIKPVIFSNYKLKPGTYLNAKLSDICLGTSAAPTYFPAYNFQNDGHKFDLVDGALDANNPDQKEILLLSLGTGTTKAEEKLSGIFDDMCWLVNNKDVLKEAIFRTDMIQYYLATVFPGLLSADNYLRIEEYNLDPSMEAIDNAKTKNMNKLEKLGKCLLSQKVKRMNVNTFIPVELNQTNAAALDRLAEKLYAERQLRLKRKSMAKGGSPIIETVKVPSGQIRAT 394
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo7g01943 394 Gene3D Cytosolic phospholipase A2 catalytic domain 28 373 - -
Pumo7g01943 394 SUPERFAMILY FabD/lysophospholipase-like 32 343 IPR016035 -
Pumo7g01943 394 ProSiteProfiles Patatin-like phospholipase (PNPLA) domain profile. 35 234 IPR002641 GO:0006629
Pumo7g01943 394 PANTHER XYLOSE ISOMERASE 230 368 - -
Pumo7g01943 394 Pfam Patatin-like phospholipase 35 229 IPR002641 GO:0006629
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo7g01943 Pumo-Chr7 51684842 51689804 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo7g01943 21 376 Miscellaneous Gene Families AT2G26560 39.163 4.31e-80 250
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo7g01943 - - gmx:100802647 537.339