Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo7g01934 ATGGGGAACGAGGTAGAAGAAGAAGAAGAAGAAGTGGTGGGTGAAGTTGAAGCAGTGGAAGCCGTGTATGGAACCGATTGCGTCCTTCTCCGTTCATTCCCTCCTCATTTTCACATCTCTCTCAAACCTAGAACCGCTGATGTTTCATCCCAACAGTTTGTAGAAGCTGTGCTGGAGATACGAGCAAGCCCACAGTATCCAAAAGAACCACCTTCTGTTGATCTTGTGGATTGCAAGGGTCTGGATGAGCAAAGACAGAAGCATCTATTAAATTACATACAGAGTAAAGCCTACGAGCTCTCCCCTTGTTTAATGCTTGTAGCTCTCTGTGAGGAAGCTGCAGAGAAACTTTCATCTATGAATCATCCTGATGGTGATTGTCCATTGTGTTTATTCCCTTTGGTCCCAGAAGATCAGCAAAGTGAAACCTTGCCTTTTATGAAGTTAATGTCTTGCTTTCATTGCTTTCACAGTGAATGTATCATTAGATGGTGGAAATGGCTTCAAAATTCTAAAGAAGTAGACTCTGCTAATATAGATAGTGCAGCTGCACATCGTAACCAAGATAATCATAAGAAAATGGAAGAGAGTGTTGGAAACTGCCCGGTCTGTCGCAAGCCTTTTCTTGCCAAGGATTTGGATCATGTGCTTGCTCTAGTTGGTTCATATTCTTCCCAATTGAGTTTGGATAATGATGAAGCCAATGATGAGGAAAAGCTCCTTCAATCAGAGGATGAGATCATTAGGAGACAGAAATTTGAAGCCATCTTAAATTTACAGAAGGAGAACAGTGGTTTGATTGAACCCAAGAAAGATATAGTAATAGTGCCTGGTATGTATCTTCCACAACCAGTTGCAATGCCCAGCTCCACTTCAACCAAGGAATCTGATGAGCAGGAACAAAAAGATCCGCCTGCAGTTGTGTCAGGAAAACATGCTGGTGGGACGTCCAACTGCAACGGACCTAGTTCTAGCAGGCAGAGAAATTTTGGTACAAGGAGGCAGAAAGCAAGAAGTGATAACCACTCTAGTTCAACTGTAAGAAATCCAAGAAAACCAGTCCAACAGTGGGTAAGAAGAGATAATCCTAGCAATAAGCAATAG 1104 0.4248 MGNEVEEEEEEVVGEVEAVEAVYGTDCVLLRSFPPHFHISLKPRTADVSSQQFVEAVLEIRASPQYPKEPPSVDLVDCKGLDEQRQKHLLNYIQSKAYELSPCLMLVALCEEAAEKLSSMNHPDGDCPLCLFPLVPEDQQSETLPFMKLMSCFHCFHSECIIRWWKWLQNSKEVDSANIDSAAAHRNQDNHKKMEESVGNCPVCRKPFLAKDLDHVLALVGSYSSQLSLDNDEANDEEKLLQSEDEIIRRQKFEAILNLQKENSGLIEPKKDIVIVPGMYLPQPVAMPSSTSTKESDEQEQKDPPAVVSGKHAGGTSNCNGPSSSRQRNFGTRRQKARSDNHSSSTVRNPRKPVQQWVRRDNPSNKQ 367
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo7g01934 367 MobiDBLite consensus disorder prediction 285 367 - -
Pumo7g01934 367 FunFam eIF-2-alpha kinase GCN2 2 126 - -
Pumo7g01934 367 SMART ring_2 127 204 IPR001841 -
Pumo7g01934 367 FunFam RWD domain-containing protein 123 220 - -
Pumo7g01934 367 MobiDBLite consensus disorder prediction 313 330 - -
Pumo7g01934 367 MobiDBLite consensus disorder prediction 342 367 - -
Pumo7g01934 367 PANTHER RING FINGER PROTEIN 25 7 356 IPR039133 GO:0061630
Pumo7g01934 367 Pfam RWD domain 12 116 IPR006575 GO:0005515
Pumo7g01934 367 ProSiteProfiles Zinc finger RING-type profile. 127 205 IPR001841 -
Pumo7g01934 367 Gene3D Ubiquitin Conjugating Enzyme 2 122 IPR016135 -
Pumo7g01934 367 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 123 219 IPR013083 -
Pumo7g01934 367 ProSiteProfiles RWD domain profile. 14 120 IPR006575 GO:0005515
Pumo7g01934 367 SMART RWD2001b 14 120 IPR006575 GO:0005515
Pumo7g01934 367 SUPERFAMILY UBC-like 8 117 IPR016135 -
Pumo7g01934 367 SUPERFAMILY RING/U-box 120 211 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo7g01934 K10640 - gmx:100791789 650.203
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo7g01934 7 51359497 51365496 Pumo7g01934 7 51359497 51365496 ECH