Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo7g01877 ATGAAGAACCATCCAGATAAGGGAGGAGATCCTGAGAAGTTCAAGGAGTTAGGTCAAGCATATGAAGTTTTAAGTGATCCTGAGAAAAAAGAACTGTATGACCAGTATGGTGAAGATGCCCTTAAAGAAGGGATGGGTGGAGGAGGCTCGTTTCATAATCCATTCGATATATTTGAATCATTTTTTGGAGGAGCAAGCTTTGGTGGTGGTGGTAGTTCCCGAGGTAGAAGACAGAAACACGGTGAAGATGTTGTGCATTCTTTAAAGGTTTCCTTGGAGGATGTCTATAATGGCACAACAAAGAAACTATCTCTTTCTAGAAACGTATTATGCCCAAAATGTAAAGGGAAAGGTTCGAAAAGTGGAACAGCTGCTAGGTGTTTTGGATGCCAAGGCACTGGTATGAAAATTACAAGAAGGCAGATTGGACTAGGCATGATTCAACAAATGCAACATGTCTGTCCTGACTGCAGAGGATCTGGTGAGGTCATTAATGAGAGAGATAAATGTCCTCCGTGCAAAGGAAACAAGGTTACCCAGGAAAAGAAGGTGCTGGAGGTGCATGTTGACAAGGGGATGCAGCAGGGTCAGAAGATTGTTTTTGAAGGACAAGCTGATGAAGCTCCTGACACAATCACAGGAGACATTGTTTTTGTATTGCAAGTAAAGGATCACCCGAAGTTCAGGAGGGAGCACGACGACCTCTTTATTGATCACAATCTCAGCTTAACGGAGGCACTCTGTGGCTTCCAGTTTGCCATCACACATCTTGATGGTAGGCAACTATTGATCAAATCAAACCCTGGGGAAGTCATCAAGCCAGGTCAATATAAAGCAATAAATGATGAGGGAATGCCACAACACAACAGGCCATTCATGAAGGGTCGCCTTTACATCCAGTTTAATGTTGATTTCCCAGACTCAGGGTTTCTTTCCCCTGACCAATTCCAGTTATTGGAAAAGGTGTTACCTCAGAAGAGCAGCAAGCACGTTTCAGATATGGAGCTGGATGACTGTGAGGAAACCACTTTGCATGATGTCAACTTTAAGGAGGAGATGCGACGAAAGCAGCAACAGCAATACCGTGAGGCATACTGA 1098 0.4381 MKNHPDKGGDPEKFKELGQAYEVLSDPEKKELYDQYGEDALKEGMGGGGSFHNPFDIFESFFGGASFGGGGSSRGRRQKHGEDVVHSLKVSLEDVYNGTTKKLSLSRNVLCPKCKGKGSKSGTAARCFGCQGTGMKITRRQIGLGMIQQMQHVCPDCRGSGEVINERDKCPPCKGNKVTQEKKVLEVHVDKGMQQGQKIVFEGQADEAPDTITGDIVFVLQVKDHPKFRREHDDLFIDHNLSLTEALCGFQFAITHLDGRQLLIKSNPGEVIKPGQYKAINDEGMPQHNRPFMKGRLYIQFNVDFPDSGFLSPDQFQLLEKVLPQKSSKHVSDMELDDCEETTLHDVNFKEEMRRKQQQQYREAY 365
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo7g01877 365 SUPERFAMILY Chaperone J-domain 1 72 IPR036869 -
Pumo7g01877 365 Gene3D DnaJ domain 1 72 IPR036869 -
Pumo7g01877 365 FunFam DnaJ subfamily A member 2 111 177 - -
Pumo7g01877 365 FunFam DnaJ subfamily A member 2 225 307 - -
Pumo7g01877 365 SUPERFAMILY HSP40/DnaJ peptide-binding domain 228 315 IPR008971 GO:0006457|GO:0051082
Pumo7g01877 365 Pfam DnaJ central domain 111 177 IPR001305 GO:0031072|GO:0051082
Pumo7g01877 365 CDD DnaJ 1 26 IPR001623 -
Pumo7g01877 365 CDD DnaJ_zf 111 177 IPR001305 GO:0031072|GO:0051082
Pumo7g01877 365 ProSitePatterns Nt-dnaJ domain signature. 14 33 IPR018253 -
Pumo7g01877 365 ProSiteProfiles Zinc finger CR-type profile. 98 182 IPR001305 GO:0031072|GO:0051082
Pumo7g01877 365 Gene3D - 225 307 - -
Pumo7g01877 365 SUPERFAMILY HSP40/DnaJ peptide-binding domain 82 226 IPR008971 GO:0006457|GO:0051082
Pumo7g01877 365 CDD DnaJ_C 82 308 - -
Pumo7g01877 365 Gene3D - 111 177 - -
Pumo7g01877 365 Gene3D - 73 223 - -
Pumo7g01877 365 SUPERFAMILY DnaJ/Hsp40 cysteine-rich domain 108 180 IPR036410 -
Pumo7g01877 365 PRINTS DnaJ domain signature 29 48 IPR001623 -
Pumo7g01877 365 PRINTS DnaJ domain signature 9 29 IPR001623 -
Pumo7g01877 365 ProSiteProfiles dnaJ domain profile. 1 37 IPR001623 -
Pumo7g01877 365 Pfam DnaJ domain 1 34 IPR001623 -
Pumo7g01877 365 PANTHER DNAJ-LIKE-2, ISOFORM A-RELATED 2 364 IPR044713 GO:0006457|GO:0030544
Pumo7g01877 365 Pfam DnaJ C terminal domain 85 306 IPR002939 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo7g01877 Pumo-Chr7 49783736 49786935 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo7g01877 K09503 - gmx:100800590 691.804