Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo7g01871 ATGATGATGCAGAGCAGAAGGGCAGGGTGGTTGTTGCTCAGAAAGGCAAAACTCAGCCTTAACACTGATCGAAACCTCTCTACTTCTCAACACGTCATTCTCGACAACCCCAATCTCAATCAGGTTTTGGTCGAAGGAAATGGATGCTCCAGAATGGCCATTCTCAATAGACCCTCTGCTCTTAATGCTCTCAACACTAACATGGCTGCTACACTGCATAAACTTTATAGGAGTTGGGAAGATAACCCTGATATTGGTTTTGTGATGGTGAAGGGCAGTGGCCGAGCATTTGCAGCTGGTGGAGATATTGTTGCGCTTTACCATTGGATAAATAAAGGAAACATGGAAGCCTGTAAAGAATTTTTTAGAACGGCATATAGTTTTATGTACCTGATAGGTACATATTTGAAGCCACATGTGGCTCTTCTGAATGGCATTACCATGGGTGGTGGGGCTGGAATTTCAATCCCTGGGACATTCCGGGTTGCAACAGACAAAACTATTTTTGCTACCCCTGAAGTTCATATTGGATTCCACCCTGATGCTGCAGCATCTTTTTACCTTTCACATTTACCTGGTCAATTAGGAGAATACTTGGCTCTGACAGGGGAAAAGCTCAACGGAGTAGAGATGGTTACCTGTGGGCTTGCTACACACTATTCATCAAGTGCAAGGCTTCCTTTAATCGAAAAACAGCTGGGGAAATTGGTTACTGATGACCCGTCTGTCATTGAAACCACTTTAGAACAGTATGGTGAGCTTGTACATCCAGACAACAGGAGTGTACTACAAAGGATTGAAATTCTAGATAAATGCTTTTGCCATGACACAGTTGAAGAGATTGTTGATGCGATGGAAAATGCAGCAAGTGAAACGAATGATGCATGGTGTATTTCTACCCTAAATAAACTTAAAGAAGCCTCTCCATTGAGCTTGAAGGTTGCCTTGAGATCTATACGGGAAGGTAGATTTCAGACACTTGATCAATGCTTGTTGAGTGAGTACCGTATGACTTTACAAGCAATACATAGGCAGATATCTGGGGACTTCTGTGAGGGAGTGAGAGCACGCGTGGTGGACAAGGACTTTGCACCAAAGTGGGATCCTCCAACCTTGGAAAAGGTGTCTCAAGATATGGTGGATCAGTACTTCTTACCGCTGAGTGAATCTGAACCTGATCTAGAGCTGCCTACAAACAGTCGTGAAGCATTTTTGTAG 1218 0.436 MMMQSRRAGWLLLRKAKLSLNTDRNLSTSQHVILDNPNLNQVLVEGNGCSRMAILNRPSALNALNTNMAATLHKLYRSWEDNPDIGFVMVKGSGRAFAAGGDIVALYHWINKGNMEACKEFFRTAYSFMYLIGTYLKPHVALLNGITMGGGAGISIPGTFRVATDKTIFATPEVHIGFHPDAAASFYLSHLPGQLGEYLALTGEKLNGVEMVTCGLATHYSSSARLPLIEKQLGKLVTDDPSVIETTLEQYGELVHPDNRSVLQRIEILDKCFCHDTVEEIVDAMENAASETNDAWCISTLNKLKEASPLSLKVALRSIREGRFQTLDQCLLSEYRMTLQAIHRQISGDFCEGVRARVVDKDFAPKWDPPTLEKVSQDMVDQYFLPLSESEPDLELPTNSREAFL 405
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo7g01871 405 Gene3D - 37 401 - -
Pumo7g01871 405 PANTHER 3-HYDROXYISOBUTYRYL-COA HYDROLASE-RELATED 39 400 IPR032259 GO:0003860
Pumo7g01871 405 FunFam Probable 3-hydroxyisobutyryl-CoA hydrolase 2 36 400 - -
Pumo7g01871 405 SUPERFAMILY ClpP/crotonase 41 370 IPR029045 -
Pumo7g01871 405 CDD crotonase-like 42 226 - -
Pumo7g01871 405 Pfam Enoyl-CoA hydratase/isomerase 51 384 IPR045004 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo7g01871 Pumo-Chr7 49696265 49705349 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo7g01871 40 405 Acyl Lipid Metabolism Gene Families AT4G31810 63.957 0.0 511
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo7g01871 K05605 - gmx:100801676 753.821
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo7g01871 7 49696265 49705349 Pumo7g01871 7 49696265 49705349 ECH