Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo7g01870 ATGGTGGCCACAGACCCAATTAGAGTTTTGGTAACTGGAGCTGCTGGTGTTGTTGCTACTACGAATGTTGTTGAAGCTTGCAAGGATGTCAACATTGCTGTGATGGTGGGTGGATTCCCACGAAAGGAAGGAATGGAAAGAAAAGACATGATGTCTAAAAATGTGTCAATTTACAAGGCTCAAGCTTCAGCACTAGAGCAACATGCTGCATCGGATTGTAAGGTACTAGTGGTTGCCAATCCAGCAAATACCAATGCTCTCATTTTGAAAGAGTTTGCTCCTTCAATTCCTGAGAAAAATATCACTTGCCTTACACGACTTGATCACAATAGAGCATTAGGCCAAATCTCTGAGAGGCTAAATGTTCATGTTAGTAATGTGAAAAATGTCATCATTTGGGGTAATCACTCCTCAACTCAATATCCAGATGTCAACCACGCATCTGTCACCGCCAATAGTGGAGAGAAACCAATCAGAAAATTAGTTGCTGATGATAACTGGCTAAACACTGAGTTCATCACCACTGTTCAGCAACGTGGGGCTTTCATTATAAAAGCCAGGAAGCTATCTAGTGCATTATCAGCAGCTAGTGCTGCATGTGATCATATACGTGATTGGGCTCTAGGTACTCCTAAGGAAACATGGGTATCAATGGGAGTATATTCTGATGGATCCTATGGTATCCCTCCTGGCCTAATTTACTCTTTCCCCGTTACATGTGAGAAAGGAGATTGGAATATTGTTCAAGGACTCGAGATCGACAAATTCTCAAGGGAAAAGATGGACAAAACTGCCCAAGAGCTTGTTGAGGAGAAAACATTGGCCAAGTCATGCCTTAATTGA 843 0.4223 MVATDPIRVLVTGAAGVVATTNVVEACKDVNIAVMVGGFPRKEGMERKDMMSKNVSIYKAQASALEQHAASDCKVLVVANPANTNALILKEFAPSIPEKNITCLTRLDHNRALGQISERLNVHVSNVKNVIIWGNHSSTQYPDVNHASVTANSGEKPIRKLVADDNWLNTEFITTVQQRGAFIIKARKLSSALSAASAACDHIRDWALGTPKETWVSMGVYSDGSYGIPPGLIYSFPVTCEKGDWNIVQGLEIDKFSREKMDKTAQELVEEKTLAKSCLN 280
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo7g01870 280 PIRSF Lac_mal_DH 7 277 IPR001557 GO:0016616|GO:0019752
Pumo7g01870 280 FunFam Malate dehydrogenase 104 280 - -
Pumo7g01870 280 Pfam lactate/malate dehydrogenase, alpha/beta C-terminal domain 105 276 IPR022383 GO:0016616
Pumo7g01870 280 ProSitePatterns Malate dehydrogenase active site signature. 104 116 IPR001252 GO:0006108|GO:0016615
Pumo7g01870 280 Gene3D - 104 280 IPR015955 GO:0003824|GO:0016616
Pumo7g01870 280 Pfam lactate/malate dehydrogenase, NAD binding domain 22 101 IPR001236 GO:0016491
Pumo7g01870 280 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 6 103 IPR036291 -
Pumo7g01870 280 PANTHER MALATE DEHYDROGENASE 15 279 IPR010945 GO:0006108|GO:0016615
Pumo7g01870 280 Gene3D - 2 103 - -
Pumo7g01870 280 NCBIfam malate dehydrogenase 15 274 IPR010945 GO:0006108|GO:0016615
Pumo7g01870 280 FunFam Malate dehydrogenase 15 103 - -
Pumo7g01870 280 SUPERFAMILY LDH C-terminal domain-like 105 279 IPR015955 GO:0003824|GO:0016616
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo7g01870 Pumo-Chr7 49669985 49675291 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo7g01870 K00025 - gmx:100783188 480.33