Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo7g01860 ATGAGGGAGTACGTGCACACTGCACAGGAGCAAAACCTTTTTCCCTCAAACCTCACGCATTCTCTTTTCTTCTTTCGTTCTCTCTTCTCTACCAATCTCAGCTTCCCTGTGATGACTCTTGTTCATTCCTCCTCCACCATGACCAACTTCTCCTCCAACCAGATACGCTTTCTCCTCAGCTCTTTGAACGAAGTCAACTTTGACTCCGTTTTCCATCAACTCTCTCAGTTCGCTGAATTTGGAACAGCTGGATGCATTTTGCTGCTTCAAACTTGCTTGGATCACTATGATTATGTCAGAAGAGATATGAAAGACATGCAGTATGAGCCAATTCTTGGGGCAGTCATTAAGCACCTCTTGGACAAACTAAACTTCAGTACAGTGTTTTCTGAGTCAATGAAGAATATAGAAATTAATGAAAGCTTTTTAGAAAGTTTTTATAACAGATTGCAGTTATCTTTATTGGAAAAAATTGTCATCAGTCTTGCTTTATCTGATTCCGAGAATCCTGATGCCAGGCTGTGTGGCAAATTTTTTTGCATAGCTCGGATTGAGGAATTGTGTGCCAACCCTAGTTCTTTGAGTTGCCATGAGCAAATTCACAGTATTATCATGTTCCTAAAGCAGTCTGAGGGTCTTTCCAAGCACGTGGATTCCTTTATGCAGATATTATCACTTGTGCAATTCAAAGACACGCCACCTTTGGCCTTGACTCCGTTGCTTCCTGATGAGATGCATGAGGCTGATTTTTTAAGGTTGAATATGGAGTTGTTCCATGAGTGTGGAGAAAATGATTTTGATGCTATTTGGGCAGACATACAGAAGGAAATGAACATGGGAGATATTGTAAAGGAACTAGGCCATGGATGCACGGTTGATGTCACACAGTGCAAGGAGATATTTTCGCTCTTCTTACCTTTAACTGATAATACGCTATCTAAATTACTTGGTGCTATTGCTTATAGTCATACTGGGCTGGAGGACAACCAGAACACATACTTAACATTTCGTGAAGCCCATGGATACAATGTGTCTGAGTTGCCACCTCTGAACTCATGGAATATTGATGTCTTGATAGATACAGTCAAGCAACTTGCACCACAAACCAATTGGGCACGCGTTATTGAAAATCTTGACCATGAAGGGTTTTTCCTTCCTAGTGAAGAAGCATTCTCTTTTCTCATGTCAGCATATAAACATGCCTGTAAGGAACCTTTTCCTCTCCATGCCATCTGTGGGTCCGTCTGGAAGAACACTGAGGGTCAACTGTCTTTCCTTAAATATGCTGTATCATCACCACCAGAAATGTTTACCTTTGCACGCTCAGGAAGACAGCTGGCATATGTTGATGCAATTAATGGCCACAAGCTTCAAAATGGACATGCAAATCATGCATGGCTGTGTCTTGACCTTTTAGACGTCCTCTGCCAGCTAGCTGAGAAGGGTCACGCCAGTGTTGTTCGATCAATCCTTGATTATCCCCTTAAACACTGTCCTGAAGTCTTGCTTCTTGGGATGGCACATATTAATACTGCCTACAACCTCTTGCAACAGGAAGTATCTCTGATTGTTTTTCCCATGATAGTAAAAAGTCCTGTGGGAAGTGGGATGATTCTACACCTTTGGCATGTTAATCCCAATCTGGTCTTGAGAGGGTTTATCAATTCTCAAATAAATGATGCAGACACCATTATAAGAATTGTGGACATCTGCCAGGAGCTAAAGATTCTATCATCCGTGGTGGAAGTTATTCCCTCTTATTATAGTATAAGGTTAGCAGCTGTTGCATCAAGAAAAGAATTCCTTGACCTTGAGAAGTGGTTGAGTAGCAACTTAACTACATACAAGGATGTCTTTTCTGAGGAGTGCCTCAAGTTCTTAAAGGATGCCCATTTTGGTGGATCACAGAACCTTTCTGGCAAATCTTTTCATCAGTCTGGTGCTGTTCTGAGTCTCTATGCCGAGACAACTGCTACCTTTTTGAAGGTTCTTAAATCTCATACTGACTTGGTTGCCTCTAGACAACTTTCTAAGGAGTTGGAGAGGCTGCATATATCTATTATAGATTACTCTCTGTTACATAGCACAGTCAGCACCTCGTCAACGCTATCTTCCTCTCGTGCTTTTATACATTGTGCTCCTTTGATCTGTGCATCTGATGTAGGGTTTGGATCTGCCTTGAACATTGAAACTTTGGTTGCAGCTGCTGAGAAAAGAGAAACTCCTATTGAGGCTCCAGGGTCAAAGGTTCAAGATAAGATATCATTTATAATTAATAATATTTTTGCTGGTAATATTGATTCTAAAGCAAAAGAGTTCACTGAAATTTTGAAAGAGCAGTACTATCCTTGGTTTGCACAATATCTGGTTATGAAAAGAGCAAGCGTTGAACCAAATTTGCATGACTTGTACCTGAAATTCCTCGATAAAGTTAATTCAAAGGCTTTGAACAAAGAGATTGCCCAGGCAACTTATGAAAATTGCAAGGTTCTTTTAGGATCAGAACTCATAAAATCAAGTTCAGAGGAACGCTCTTTGCTTAAAAATGTTGGGAGCTGGCTTGGAAAGTTAACAATTGGCCGGAATCGGGTTTTGAAGGCTCGTGAAATAGACCCAAAGTCTTTGATTATAGAGGCATATGGGAAGGGGCTAATGATTGCTGTTATTCCATTTACGTCAAAGGTCCTCAAATCATGCCAAAGCAGTCTTGCATATGAACCTTCTAATCCTTGGACTATGGGCATTTTGGGATTGCTTTCTGAGATTTACTCAATGCCAAACTTGAAAATGAACCTCAAGTTTGACATAGAGGTTTTGTTCAAAAATCTTAGTGTAGATATGAAGGATGTCACACCAACTTCTCTCCTGAAGGATAGAAAAAGAGAAATCAAAGGAAATCCAGATTTCTCTGATAAATATGTTGTGGCATCTCAAGCACAAATGATTACCGATATAAAATCTGGCCTTGTACCTCCAGTAAATCAAGCTGAATTACCACTTGAAGTCACCAATCCATCCAATATGGGGGCTCATCCACATGTACTGTCTCAGTATGCTGGTCCTCTTCATATTTCCTCGGGAGCATTTATGGAAGATGAAAAGGTTACACCTCTAGGATTGTCTGATCAACTTCCCTCTGCTCAAGGACAGTTACAAGCAACTCCTGCCCCAGCACCTTTTTCTATTAGCCAGCTTCCAACACAGATACCTAATATTGGGACTCACGTTATTATCAATCAAAAGCTAAGTGGTCTTGGGTTGCAAATGCATTTTCAGAGGTATGCGGTACCCATTGCAATGGACAGAGCTATCAAAGAGATAGTGTCTAGTATTTTTGTTCAGAGAACTGTTATCATGGCAACAAAAACAACCATGGAGCTTGTTTTAAAGGATTATGCTATGGAATCTGATGAGACACGTATATTAAATGCGGCACACTTGATGGTCGCTTGTCTGGCTGGGAGTTGGGCTCATGTTACATGCAAAGAACCATTATGGGCATCAATATATAGTCAGCTGAGGAATTCACTTCAGAACTTAAATATTGCTAATGAAGTTTTGGAACAAGCTGTGCAACTTGTCACCAATGATAATCTTGATCTAGGATTTGCAGTCATTGAACAGGCTGCTACTGATAAGGCGATAAATACCATTGATACAGAGATTAGTCAACAACTCTCTTTGAGAAGGAAGCATCGACAAGGTATCAGTTCTACATTTTGTTATGCGAGCAGGGAAGAGTTCAACGGCGGAGGTTCTGTTGAACCAGATCCTTCTGGGTTCCGCAAGCAGGTTTCCATGTTGTTTACAGAATGGTATAGGATATGTGAATTTCCTGGTGCCAATGATACAGCTTCTGCCCACTTCATCTTACAATTGCATCAGAATGGGCTGCTTAAGGGGGATGATGCTACAGATCGTTTTTTCCAACTATTGATGGAACTAGCTGTTGCACGTTGCTTATCCACTGAGGTGGTTAATTCAGGGTCACTGCAATCTCAACCGCCGACAATGTCATTTCTTGCAATTGATATTTATGCAAAGCTTGTCTTCTCAATCTTGAAGATTCTGGCAGTTACTGTGAAATTCATTATAAAAGATGCAGAGGAGAAGAAAGCCTCTTTTAATCCAAGGCCACTTTTCAGATTATTCATCAACTGGCTTCTAGATCTTGGTTCACTTGAGCCTGTTACTGATGGTGCAAAGGTGTTTATTTTGACTGCTTTTGCCAGTGCATTTCATGCTTTGCAGCCCCTCAAAGTTCCTGCATTCAGTTTTGCATGGCTTGAGTTGATTAGTCATAGGAGCTTCATGCCAAAAATGTTGACTGATAATGGTAAAAAAGGTTGGCCTTATATCCAAAGGTTGCTTGTAGATCTGTTCCAATTTATGGAGCCTTTTCTGAGGCATGCTGAACTTGGAGAACCGGTTCGTGTCCTCTATAAAGGCACACTTAGGGTGCTCTTAGTGCTACTTCATGACTTCCCTGAGTTTCTATGTGACTATCACTTTACCCTTTGTGATGTTATTCCTCCAAGTTGCATACAGATGAGGAATATCATTCTAAGTGCATTTCCGCGTGGTATGAGGCTGCCAGATCCATCTACTCCTAATTTGAAGATTGATTTGCTTCAAGAAATAACCCAATCGCCATGCATTCTTTCTGAGGTTGATACAGCACTTGAAGCAAAGCAGATGAAGGCCGATGTAGATGAATACCTCAAGACAAGGCAGCAGCGTTCTCCATTTTTATCTGAACTGAAGGATAAGCTGCTTCTCTCACCCAACGAAGCTGCCTCTGCTGGGACTCGATACAATGTGCTGTTAATCAACTCACTTGTGCTATATGTAGGAATGCAGGCAATCCATCAGCTTCAGGGACGAACTCCCCATACACAAACATCAGCAAATGCTTTCCCCTTAGCCGTATTTTCTGTTGGTGCTGCATTGGATATTTTCCAGACACTAATTGTGGACTTGGACACTGAAGGGCGCTACCATTTCCTAAATGCTATTGCCAACCAACTGCGTTATCCTAATACTAATACACACTACTTTTCCTTCATCCTTCTGTACTTGTTTGCAGAATCAAACCAGCAGGAAGTTACCCAAGAACAAATTACTAGAGTCTTGTTAGAACGCCTAATTAACCGTCCTCATCCCTGGGGTCTCCTCATTACTTTTATTGAGCTGATCAAGAATCCTAGGTACAATTTCTGGAACTGGAGTTTCATAAGATGTGCACCGGAGATCGAAAAACTTTTTGAATCGCTGTCAAGATCTTGTGGAGGTCCAAAACCAGTGGATGATAGCATGGTTTTGGGTTGGGTCTGA 5334 0.4117 MREYVHTAQEQNLFPSNLTHSLFFFRSLFSTNLSFPVMTLVHSSSTMTNFSSNQIRFLLSSLNEVNFDSVFHQLSQFAEFGTAGCILLLQTCLDHYDYVRRDMKDMQYEPILGAVIKHLLDKLNFSTVFSESMKNIEINESFLESFYNRLQLSLLEKIVISLALSDSENPDARLCGKFFCIARIEELCANPSSLSCHEQIHSIIMFLKQSEGLSKHVDSFMQILSLVQFKDTPPLALTPLLPDEMHEADFLRLNMELFHECGENDFDAIWADIQKEMNMGDIVKELGHGCTVDVTQCKEIFSLFLPLTDNTLSKLLGAIAYSHTGLEDNQNTYLTFREAHGYNVSELPPLNSWNIDVLIDTVKQLAPQTNWARVIENLDHEGFFLPSEEAFSFLMSAYKHACKEPFPLHAICGSVWKNTEGQLSFLKYAVSSPPEMFTFARSGRQLAYVDAINGHKLQNGHANHAWLCLDLLDVLCQLAEKGHASVVRSILDYPLKHCPEVLLLGMAHINTAYNLLQQEVSLIVFPMIVKSPVGSGMILHLWHVNPNLVLRGFINSQINDADTIIRIVDICQELKILSSVVEVIPSYYSIRLAAVASRKEFLDLEKWLSSNLTTYKDVFSEECLKFLKDAHFGGSQNLSGKSFHQSGAVLSLYAETTATFLKVLKSHTDLVASRQLSKELERLHISIIDYSLLHSTVSTSSTLSSSRAFIHCAPLICASDVGFGSALNIETLVAAAEKRETPIEAPGSKVQDKISFIINNIFAGNIDSKAKEFTEILKEQYYPWFAQYLVMKRASVEPNLHDLYLKFLDKVNSKALNKEIAQATYENCKVLLGSELIKSSSEERSLLKNVGSWLGKLTIGRNRVLKAREIDPKSLIIEAYGKGLMIAVIPFTSKVLKSCQSSLAYEPSNPWTMGILGLLSEIYSMPNLKMNLKFDIEVLFKNLSVDMKDVTPTSLLKDRKREIKGNPDFSDKYVVASQAQMITDIKSGLVPPVNQAELPLEVTNPSNMGAHPHVLSQYAGPLHISSGAFMEDEKVTPLGLSDQLPSAQGQLQATPAPAPFSISQLPTQIPNIGTHVIINQKLSGLGLQMHFQRYAVPIAMDRAIKEIVSSIFVQRTVIMATKTTMELVLKDYAMESDETRILNAAHLMVACLAGSWAHVTCKEPLWASIYSQLRNSLQNLNIANEVLEQAVQLVTNDNLDLGFAVIEQAATDKAINTIDTEISQQLSLRRKHRQGISSTFCYASREEFNGGGSVEPDPSGFRKQVSMLFTEWYRICEFPGANDTASAHFILQLHQNGLLKGDDATDRFFQLLMELAVARCLSTEVVNSGSLQSQPPTMSFLAIDIYAKLVFSILKILAVTVKFIIKDAEEKKASFNPRPLFRLFINWLLDLGSLEPVTDGAKVFILTAFASAFHALQPLKVPAFSFAWLELISHRSFMPKMLTDNGKKGWPYIQRLLVDLFQFMEPFLRHAELGEPVRVLYKGTLRVLLVLLHDFPEFLCDYHFTLCDVIPPSCIQMRNIILSAFPRGMRLPDPSTPNLKIDLLQEITQSPCILSEVDTALEAKQMKADVDEYLKTRQQRSPFLSELKDKLLLSPNEAASAGTRYNVLLINSLVLYVGMQAIHQLQGRTPHTQTSANAFPLAVFSVGAALDIFQTLIVDLDTEGRYHFLNAIANQLRYPNTNTHYFSFILLYLFAESNQQEVTQEQITRVLLERLINRPHPWGLLITFIELIKNPRYNFWNWSFIRCAPEIEKLFESLSRSCGGPKPVDDSMVLGWV 1777
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo7g01860 1777 Gene3D - 1528 1757 - -
Pumo7g01860 1777 FunFam Ccr4-Not transcription complex subunit 718 964 - -
Pumo7g01860 1777 PANTHER CCR4-NOT TRANSCRIPTION COMPLEX 1252 1766 IPR040398 GO:0017148|GO:0030015
Pumo7g01860 1777 FunFam Transcription regulator 1251 1531 - -
Pumo7g01860 1777 Pfam CCR4-NOT transcription complex subunit 1 HEAT repeat 519 665 IPR032194 -
Pumo7g01860 1777 Coils Coil 1170 1197 - -
Pumo7g01860 1777 Gene3D - 720 965 - -
Pumo7g01860 1777 FunFam CCR4-NOT transcription complex subunit 1 1528 1757 - -
Pumo7g01860 1777 Pfam CCR4-Not complex component, Not1 1390 1758 IPR007196 -
Pumo7g01860 1777 Pfam CCR4-NOT transcription complex subunit 1 CAF1-binding domain 743 962 IPR032191 -
Pumo7g01860 1777 Gene3D - 1252 1527 - -
Pumo7g01860 1777 Pfam CCR4-Not complex, Not1 subunit, domain of unknown function DUF3819 1094 1233 IPR024557 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo7g01860 Pumo-Chr7 49357183 49446688 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo7g01860 K12604 - gmx:100818196 2821.57
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo7g01860 7 49357183 49446688 Pumo7g01860 7 49357183 49446688 ECH