Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo7g01746 ATGGAAATCAATTCTCTATCACTCCCCTCTTGCCGTATTCCCACTCTGCTAAAGGGTTCTCGCAGCAAAGCCCCTCAACAACACAACAAGTTAATCTGGTGGCGGAATGAGAAAGGAGTAATCGGTGATATGGACAGCAGTGTAGATTGCTCTTCATTGGTTCAAAACTCTAGTAGGAAAAGAATGATTCATCAATCTGATGGGGTTTTTCATGATATGAAAGTTGATGGTTATATGCCAAAACAGACCTCTCTGTGTGTTTTGATGCTATATTACACAGAGAATGGCATCTTTCCTCAAGCACAGACTATATGGGAGCAGCTCCTAAATAGTTCTTTTGTTCCTTCTCTTCAATTCATTTCAAGATTATTTGATGCTTATGCAAAACACGGGAAATTCGATGAAGTGATTGATATCCTACGTTATGTGGATATGAGGAATTTCGGTATATTACCTGATGTTTACTCATTGGCCATCTCTTGTTTTGGAAGAGAAGGGCAACTTGAGTTGATGGAAGATATGGCAAAGGAAATGGCTTCAAGAGGTGTCCATATCTGTTCTAGAACTGCTAATGCTTACCTTTTGTATTCTAGTATTTTTGGTTCTTTGAAAGAGATGGAGAACGCGTATGGCCGCCTTAAGAAATCTAGATTTCTGATAGAGAAGGAAGCGATTCGGGCCATGGCCTCTGCATATATAAAGGAGAGAAAGTTCTATGAATTGGGTGAGTTCCTTAGAGATGTGGGTCTGGGTAGGAAAAATGTAGGAAACCTTTTATGGAATCTTATGTTACTTTCTTATGCTGCCAATTTCAAAATGAAAAGCTTGCAGCGAGAATTTATCGGAATGGTGGAATCTGGGTTCCGTCCTGATATTACGACCTTTAATATCCGTGCACTGGCCTTCTCAAGGATGGCTTTGTTCTGGGACCTCCACCTTAGCATTGAACATATGGAACATGAGAAGGTCATTCCTGATCTAGTGACTTTTGGGTGTGTAGTTGATGCATACTTGGATAGAAGGCTTGGAAGAAACTTGGACTTTGCTTTAAAAAAAATGAACTTGGATGATTCTCCACAATTGTTAACAGATCCGGTTGTGTATCAGGCCTTAGGTAAAGGGGACTTTCACATGAGTTCTGAAGCATTTTTTGAGTTCAAGACACAAAGGAAATGGGCTTACCGTGCTTTGATACAAAAGTATCTCAAGAAACATTATCGGAAGAACCAGATATTTTGGAATTACTAA 1248 0.3974 MEINSLSLPSCRIPTLLKGSRSKAPQQHNKLIWWRNEKGVIGDMDSSVDCSSLVQNSSRKRMIHQSDGVFHDMKVDGYMPKQTSLCVLMLYYTENGIFPQAQTIWEQLLNSSFVPSLQFISRLFDAYAKHGKFDEVIDILRYVDMRNFGILPDVYSLAISCFGREGQLELMEDMAKEMASRGVHICSRTANAYLLYSSIFGSLKEMENAYGRLKKSRFLIEKEAIRAMASAYIKERKFYELGEFLRDVGLGRKNVGNLLWNLMLLSYAANFKMKSLQREFIGMVESGFRPDITTFNIRALAFSRMALFWDLHLSIEHMEHEKVIPDLVTFGCVVDAYLDRRLGRNLDFALKKMNLDDSPQLLTDPVVYQALGKGDFHMSSEAFFEFKTQRKWAYRALIQKYLKKHYRKNQIFWNY 415
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo7g01746 415 Pfam PPR repeat 154 183 IPR002885 -
Pumo7g01746 415 Pfam PPR repeat 123 141 IPR002885 -
Pumo7g01746 415 NCBIfam pentatricopeptide repeat 154 183 IPR002885 -
Pumo7g01746 415 Gene3D Tetratricopeptide repeat domain 47 243 IPR011990 GO:0005515
Pumo7g01746 415 Gene3D Tetratricopeptide repeat domain 254 396 IPR011990 GO:0005515
Pumo7g01746 415 PANTHER OS08G0520200 PROTEIN 31 410 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo7g01746 11 404 Glycosyltransferase AT1G05670 20.741 5.25e-08 53.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo7g01746 - - gmx:100818684 747.658