Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo7g01744 ATGGCTAGTTTGCCAACTAGGGTTGCTTTTTTGGCCCTTGTGTGCCTGGCTCTTGGTGCAACAACAACCATTCCCAGGGCACAAGGGGAAGTGACATGTGGCCAAGTGGTGAGCAACCTGACCCCATGCATTTCCTATGTGGTGTATGGTGGAGCCACCGTTCCTGCTCAGTGCTGCAATGGGATCAAGAACCTCTATGGCATGGCTCAGACCAAACCAGACCGCCAAGCCGTTTGCAACTGCATCAAGAATGGTGTTAGGAACAGTGGCTTCACCTACTCAAACTTCAATCTCAACCTTGCTGCTAACCTTCCCAAGAAATGTGGGGTCAACATTCCCTACCAGATCAGCCCCAATACAGACTGCACCAGGGTGCAGTGA 381 0.5171 MASLPTRVAFLALVCLALGATTTIPRAQGEVTCGQVVSNLTPCISYVVYGGATVPAQCCNGIKNLYGMAQTKPDRQAVCNCIKNGVRNSGFTYSNFNLNLAANLPKKCGVNIPYQISPNTDCTRVQ 126
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo7g01744 126 ProSitePatterns Plant lipid transfer proteins signature. 104 125 IPR000528 GO:0006869|GO:0008289
Pumo7g01744 126 Pfam Protease inhibitor/seed storage/LTP family 33 122 IPR016140 -
Pumo7g01744 126 PANTHER NON-SPECIFIC LIPID-TRANSFER PROTEIN 2-RELATED 9 123 IPR000528 GO:0006869|GO:0008289
Pumo7g01744 126 PRINTS Plant phospholipid transfer protein signature 32 48 IPR000528 GO:0006869|GO:0008289
Pumo7g01744 126 PRINTS Plant phospholipid transfer protein signature 95 112 IPR000528 GO:0006869|GO:0008289
Pumo7g01744 126 PRINTS Plant phospholipid transfer protein signature 53 67 IPR000528 GO:0006869|GO:0008289
Pumo7g01744 126 PRINTS Plant phospholipid transfer protein signature 113 124 IPR000528 GO:0006869|GO:0008289
Pumo7g01744 126 CDD nsLTP1 31 123 - -
Pumo7g01744 126 SMART aai_6 33 122 IPR016140 -
Pumo7g01744 126 Gene3D - 30 126 IPR036312 -
Pumo7g01744 126 SUPERFAMILY Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin 31 125 IPR036312 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo7g01744 Pumo-Chr7 45893294 45894699 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo7g01744 7 126 Acyl Lipid Metabolism Gene Families AT2G38540 45.000 2.06e-28 99.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo7g01744 - - gmx:100793733 226.483