Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo7g01743 ATGGCACATGCTACGATCACGTGCGGGCAGGTGACGGGCTCCCTGGCTCCATGCATCGGTTACCTTCAGAAGGGAGGAACGGTGCCGCCAGGGTGCTGCTCCGGAGTGAAGAACCTCAACGCTGCCGCCAAGACCACCGCGGACCGCCAGGCCGCCTGCAACTGCATCAAATCAGCCGCCGGCGCCATTTCCGGCTTCAATGCCCAAAACGCAGCCTCGCTCCCCGGCAAATGCGGCGTCAACATCCCCTACAAGATCAGCACCTCCACCAACTGCGCTACGTAA 285 0.6246 MAHATITCGQVTGSLAPCIGYLQKGGTVPPGCCSGVKNLNAAAKTTADRQAACNCIKSAAGAISGFNAQNAASLPGKCGVNIPYKISTSTNCAT 94
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo7g01743 94 Pfam Protease inhibitor/seed storage/LTP family 8 92 IPR016140 -
Pumo7g01743 94 SMART aai_6 8 92 IPR016140 -
Pumo7g01743 94 PRINTS Plant phospholipid transfer protein signature 48 63 IPR000528 GO:0006869|GO:0008289
Pumo7g01743 94 PRINTS Plant phospholipid transfer protein signature 83 94 IPR000528 GO:0006869|GO:0008289
Pumo7g01743 94 PRINTS Plant phospholipid transfer protein signature 27 41 IPR000528 GO:0006869|GO:0008289
Pumo7g01743 94 PRINTS Plant phospholipid transfer protein signature 7 23 IPR000528 GO:0006869|GO:0008289
Pumo7g01743 94 PRINTS Plant phospholipid transfer protein signature 65 82 IPR000528 GO:0006869|GO:0008289
Pumo7g01743 94 Gene3D - 5 94 IPR036312 -
Pumo7g01743 94 SUPERFAMILY Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin 6 93 IPR036312 -
Pumo7g01743 94 FunFam Non-specific lipid-transfer protein 5 94 - -
Pumo7g01743 94 CDD nsLTP1 6 92 - -
Pumo7g01743 94 PANTHER NON-SPECIFIC LIPID-TRANSFER PROTEIN 2-RELATED 3 93 IPR000528 GO:0006869|GO:0008289
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo7g01743 Pumo-Chr7 45878024 45878308 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo7g01743 3 92 Acyl Lipid Metabolism Gene Families AT5G59320 66.667 6.92e-38 121
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo7g01743 - - gmx:100306510 162.155