Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo7g01739 ATGGGGGAGCATGTAGCAGCGGTACACACTGCTACTAACGCTTTGCAAGCATTAGGGAGGGGTTTTGATGTGAACTTTGATACGAGGCTGCTTTATTGTAAAGGAGTTTCAGGGTCTAGGGTAGTTGAGATTGATGAAGAACACCGTAAGGAGCTGTGGTTGTACGATGATGTAGCTGTTCCCGATGTTTCCAGGGACATTGGATGCTCCCAAGAGACCATGGAGCGTCAGAGTTCTGGGGTCCGCAGTTTTCAAGAGATGGTGGAATACTTTAATGAAAGGGCAAATATATCAGGGAACTTTCCTATTGGGAGTTTTAACTCTGCATTTAGCTTCACTGGTTCAAAACATGTTGATGCTGCAGCCACAAAAACCTTGTCTACAGATGGGTTTTACATTCCTCTTGCAAAGGTTCAGCTTAAAAAATCCCACTTAACGTTGCAAGGAAATGTCAAAAAGGCTGTCCCAGTCAATTGGGACCCAACGTCCTTGGCAAGTTTTATTGAAAATTTTGGGACTCATGTCATTACATCAATAACTATTGGTGGTAAAGATGTTATTTATGTTAAACAACATCATACTTCTCCTTTGTCAAAGTTGGAGATGAAAACCTATATTCAGGATATTGGAAATCAGAGGTTCTCTGACATCAATAGCCAAACAAGTTCAGGTCAAACAAAATCCAAGGATAAGGGTGTTGATCCATTTTCATTCAATAGTCAGGGGGTTTACCCCCAACCCACAACTGCAACATATCCTACTGGGAAAGAAATTACAGTCGGACGAAGGCCAGTAACCGGTTTACGTCTTTGTCTAGAAGGAAGCAAGCAGAATCGACTGAGTGTTCACGTTGAACACTTGGTATCCCTTCCGAAAATCCTCCATCCATATTGGGACAGCCATGTTGCTATAGGCGCTCCCAAGTGGCAGGGACCCGAGGAGCAAGACAGTCGGTGGTTTGAGCCTGTTAAGTGGAAGAACTTTTCTCACGTGAGCACGGCACCGATTGAGAACCCTGAAACCTTCATAGGAGACTTCTCTGGTGTCTGCATAGTTACTGGAGCACAGCTTGGAGTGTGGGATTTCGGATCACGGAATGTATTGTACATGAAGCTCTTGTATTCAAGGTTACCCGGCTGCACGATCCGAAGATCGCTGTGGGATCATGTCCCGAGCAAGCCGCCAAAAACTGTGAATGCTGGAAACACCTCCAGCCTGGATAACTTGACCCTTAGAGAAAATGCCACAGGCAACAAGTTGGTAAAGTATGTTGACTTGTCTGAGATGACCAAAGGACCCCAAGACCCTCCTGGCCATTGGCTAGTCACTGGTGGAAAGCTTGGTGTTGAAAAAGGGAAAATTGTTTTGAGAGTGAAATATTCATTGCTTAATTACTGA 1398 0.4456 MGEHVAAVHTATNALQALGRGFDVNFDTRLLYCKGVSGSRVVEIDEEHRKELWLYDDVAVPDVSRDIGCSQETMERQSSGVRSFQEMVEYFNERANISGNFPIGSFNSAFSFTGSKHVDAAATKTLSTDGFYIPLAKVQLKKSHLTLQGNVKKAVPVNWDPTSLASFIENFGTHVITSITIGGKDVIYVKQHHTSPLSKLEMKTYIQDIGNQRFSDINSQTSSGQTKSKDKGVDPFSFNSQGVYPQPTTATYPTGKEITVGRRPVTGLRLCLEGSKQNRLSVHVEHLVSLPKILHPYWDSHVAIGAPKWQGPEEQDSRWFEPVKWKNFSHVSTAPIENPETFIGDFSGVCIVTGAQLGVWDFGSRNVLYMKLLYSRLPGCTIRRSLWDHVPSKPPKTVNAGNTSSLDNLTLRENATGNKLVKYVDLSEMTKGPQDPPGHWLVTGGKLGVEKGKIVLRVKYSLLNY 465
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo7g01739 465 Pfam MAC/Perforin domain 104 227 IPR020864 -
Pumo7g01739 465 ProSiteProfiles Membrane attack complex/perforin (MACPF) domain profile. 1 324 IPR020864 -
Pumo7g01739 465 MobiDBLite consensus disorder prediction 216 251 - -
Pumo7g01739 465 PANTHER MACPF DOMAIN-CONTAINING PROTEIN CAD1 5 239 IPR044663 GO:0006952|GO:0012501|GO:2000031
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo7g01739 Pumo-Chr7 45805412 45811256 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo7g01739 - - atr:18432277 563.918