Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo7g01724 ATGCCCAATGAAGAGATGGAGCCACGCGTCAATCATTTGCGTTGTCTTCATCCCGACAACAACTATATTTTACCTCTGATAATGATCAACAGTTTATTGCATCCACTCCAGCAGAATTCTACAGATTTCGATGATTCACATGAAGAACTTCATAATGATGGACAACACACAACACCACCACCACCACAACAACAACAACCCCGCCAAAATCCGCCACGTATGAGGAAACCTCGACCTTGTGGAACTGGATCGCGCTTTGAACTCTGCAAACAGGTCCACCTCTGTCAATCTGCAAAGATGTCGTCACAAGTTCAAGGAAATAATACCTGTCACTCTTGCAAAGATACTGTTTCAGCCTTACTGGTTAAGTTGAATGATCCTGACACCAAGCTTGAGATAATGGAGGCACTGTTGAAGGCATGCAATTCTATGGAGAAGTTTGCCAAGAAGTGCAAGAGGATGGTTTTTGAGTATGGACCTTTGATTCTTGTCAAGGCAGAGAAGTTCCTGAAAACAGCAGATATATGCACTACATTACATGCCTGCCCAGCTTCCACTGCAGTTAGCAACAAGGAAGCCTCAATCATGGAAGAAGTACCTTTGATTTCTGACTCTTAA 618 0.4337 MPNEEMEPRVNHLRCLHPDNNYILPLIMINSLLHPLQQNSTDFDDSHEELHNDGQHTTPPPPQQQQPRQNPPRMRKPRPCGTGSRFELCKQVHLCQSAKMSSQVQGNNTCHSCKDTVSALLVKLNDPDTKLEIMEALLKACNSMEKFAKKCKRMVFEYGPLILVKAEKFLKTADICTTLHACPASTAVSNKEASIMEEVPLISDS 205
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo7g01724 205 ProSiteProfiles Saposin B type domain profile. 106 186 IPR008139 -
Pumo7g01724 205 PANTHER SAPOSIN-RELATED 87 191 - -
Pumo7g01724 205 MobiDBLite consensus disorder prediction 38 81 - -
Pumo7g01724 205 Pfam Saposin-like type B, region 2 149 182 IPR008138 -
Pumo7g01724 205 SMART sapb_4 108 182 IPR008139 -
Pumo7g01724 205 FunFam Pulmonary surfactant-associated protein B 106 184 - -
Pumo7g01724 205 MobiDBLite consensus disorder prediction 60 74 - -
Pumo7g01724 205 Gene3D - 106 185 - -
Pumo7g01724 205 SUPERFAMILY Saposin 107 184 IPR011001 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo7g01724 Pumo-Chr7 45574537 45579970 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo7g01724 K12382 - gmx:100527899 214.927